Transcription factor

Q6ZNA1 - ZNF836

Zinc finger protein 836

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 936 aa

79 Generated PWM 7 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)78

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	69.4% identity		Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	68.1% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	67.0% identity		Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	67.0% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	65.9% identity		Open · Scan
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	65.4% identity		Open · Scan
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	64.7% identity		Open · Scan
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	64.7% identity		Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	63.6% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	63.6% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	63.5% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	62.7% identity		Open · Scan
M02924_2.00	NN 70-40%	CisBP	AGTGTTAACAGAACACCT	61.9% identity		Open · Scan
MA1124.1	NN 70-40%	JASPAR	CATTCATTCATTC	61.6% identity		Open · Scan
M08985_2.00	NN 70-40%	CisBP	TGAGGACCTACTGTGTGCC	60.0% identity		Open · Scan
M07613_2.00	NN 70-40%	CisBP	TCACTCAGTCATTCA	59.4% identity		Open · Scan
M08375_2.00	NN 70-40%	CisBP	TTCCCCATTGGCTACTGCACCGGTCCT	59.4% identity		Open · Scan
M04650_2.00	NN 70-40%	CisBP	GCATAACTGCCCCGCTGCC	59.1% identity		Open · Scan
M00945_2.00	NN 70-40%	CisBP	CACCGCAC	58.6% identity		Open · Scan
M07590_2.00	NN 70-40%	CisBP	TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT	58.6% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	58.5% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	57.6% identity		Open · Scan
M08887_2.00	NN 70-40%	CisBP	CCTCCTCCAGGAAGCCTTCCCTGA	57.3% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	57.2% identity		Open · Scan
M04613_2.00	NN 70-40%	CisBP	CTCATGTGCTAATTACAAA	56.7% identity		Open · Scan
M08334_2.00	NN 70-40%	CisBP	TTTGTTTTTTTCTGATTGCTTTTTACTTAT	56.6% identity		Open · Scan
M04598_2.00	NN 70-40%	CisBP	CGCTAACTCTCCACA	56.5% identity		Open · Scan
M08901_2.00	NN 70-40%	CisBP	CCAGTTCACACC	56.4% identity		Open · Scan
M07620_2.00	NN 70-40%	CisBP	TTGGATCTGTGGATTCATGTCTTTCAT	55.6% identity		Open · Scan
M07686_2.00	NN 70-40%	CisBP	TAGCTTGTTTCCAGCCAC	55.5% identity		Open · Scan
M07754_2.00	NN 70-40%	CisBP	CGCCCCCTCCCT	55.5% identity		Open · Scan
M08395_2.00	NN 70-40%	CisBP	GCTGCCTACTCTTCC	55.5% identity		Open · Scan
M07683_2.00	NN 70-40%	CisBP	GTGGGAAAGCCT	55.4% identity		Open · Scan
MA1601.1	NN 70-40%	JASPAR	ATGTGGGAAA	55.4% identity		Open · Scan
M07579_2.00	NN 70-40%	CisBP	CATCTCCAGGA	55.1% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	55.0% identity		Open · Scan
M07600_2.00	NN 70-40%	CisBP	GCATTAGC	54.9% identity		Open · Scan
M08252_2.00	NN 70-40%	CisBP	CCGGCTCCAGCACCC	54.8% identity		Open · Scan
M01456_2.00	NN 70-40%	CisBP	GTGATCGGCG	54.7% identity		Open · Scan
M00786_2.00	NN 70-40%	CisBP	TATATATAT	54.6% identity		Open · Scan
M08283_2.00	NN 70-40%	CisBP	GACTTTTATTTT	54.6% identity		Open · Scan
M04465_2.00	NN 70-40%	CisBP	GTGATTCTTATCTTATCCTT	54.2% identity		Open · Scan
M04536_2.00	NN 70-40%	CisBP	ACGTAACCCGATACC	54.1% identity		Open · Scan
M08347_2.00	NN 70-40%	CisBP	GCCCTGGGCAGC	54.0% identity		Open · Scan
M08274_2.00	NN 70-40%	CisBP	TTACTTGCAGCCCAACGCATTCCTAAC	53.9% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	53.8% identity		Open · Scan
M08373_2.00	NN 70-40%	CisBP	CCCCCTGGCTCTTCCTCT	53.8% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	53.8% identity		Open · Scan
M02896_2.00	NN 70-40%	CisBP	TGCTTTCTAGGAATTCA	53.3% identity		Open · Scan
M07649_2.00	NN 70-40%	CisBP	CCCCCCCCCCCCTCAGGAATGCC	53.3% identity		Open · Scan
M08254_2.00	NN 70-40%	CisBP	CTGCCCTGGGACTTT	53.3% identity		Open · Scan
MA0731.1	NN 70-40%	JASPAR	TGCTTTCTAGGAATTCA	53.3% identity		Open · Scan
M07633_2.00	NN 70-40%	CisBP	CTCTCGTTGTGCCTTTGCCAT	53.2% identity		Open · Scan
M07701_2.00	NN 70-40%	CisBP	CCTGGGCTAGGCCCTGGC	53.2% identity		Open · Scan
M07747_2.00	NN 70-40%	CisBP	TGGTCTATAAAGGGCCTGGTT	53.2% identity		Open · Scan
M07566_2.00	NN 70-40%	CisBP	TCAAACCATCCTTGC	53.1% identity		Open · Scan
M08314_2.00	NN 70-40%	CisBP	ATTCATCAAGGTCCTCAACAATGG	53.0% identity		Open · Scan
M07753_2.00	NN 70-40%	CisBP	TGCATTCCTTGGCTTGTG	52.7% identity		Open · Scan
M08311_2.00	NN 70-40%	CisBP	CTGGAACAGAAGGGGCGA	52.7% identity		Open · Scan
M07618_2.00	NN 70-40%	CisBP	CCTTTGGTGCTC	52.6% identity		Open · Scan
M07582_2.00	NN 70-40%	CisBP	TCCCTG	52.5% identity		Open · Scan
M07699_2.00	NN 70-40%	CisBP	GGTTTAT	52.3% identity		Open · Scan
MA1597.1	NN 70-40%	JASPAR	CCCAGGGAAGCCATTTC	52.1% identity		Open · Scan
M07657_2.00	NN 70-40%	CisBP	CCCCTGCATGTCCCCATTTTT	52.0% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	51.9% identity		Open · Scan
M07759_2.00	NN 70-40%	CisBP	GGAGCGCCCCTGCCCGGC	51.7% identity		Open · Scan
M07598_2.00	NN 70-40%	CisBP	CTGACAATACCAAGTGTTGAC	51.5% identity		Open · Scan
M00217_2.00	NN 70-40%	CisBP	TTACTCAATAT	51.4% identity		Open · Scan
M00609_2.00	NN 70-40%	CisBP	GGAAGCCCTA	51.3% identity		Open · Scan
M01474_2.00	NN 70-40%	CisBP	CGCCGATCAC	50.9% identity		Open · Scan
M07562_2.00	NN 70-40%	CisBP	GAAAAAAAC	50.9% identity		Open · Scan
M03671_2.00	NN 70-40%	CisBP	ATTACCATACAAGTGCAC	50.8% identity		Open · Scan
M07723_2.00	NN 70-40%	CisBP	CCGCTGCTCCCTGCT	50.7% identity		Open · Scan
M00645_2.00	NN 70-40%	CisBP	CGCCCACGCA	50.6% identity		Open · Scan
MA0528.1	NN 70-40%	JASPAR	GGAGGAGGAGGGGGAGGAGGA	50.6% identity		Open · Scan
MA1154.1	NN 70-40%	JASPAR	CTTTCCCACAACACGAC	50.3% identity		Open · Scan
M07688_2.00	NN 70-40%	CisBP	GAGCCCCAAGCA	50.0% identity		Open · Scan
M10303_2.00	NN 70-40%	CisBP	TACTGGGAATACC	50.0% identity		Open · Scan

ModCRE1

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_sp_Q6ZNA1_ZN836_HUMAN:747:857_5ei9_E_1	ModCRE	Homology model	ACCCCAGGGGGCCCCCT	Region 747-857 · 1 3D model		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 936 aa

217-544

747-857

Region 217-544 0 PWM

Residues

328 aa

Domains

PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

6 active PDBs · 6 summary rows

Templates

1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M

Sources

Predicted = Low

Scan this region Show models

Region 747-857 1 PWM

Residues

111 aa

Domains

PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

1 active PDB

Templates

5EI9

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

7 active PDB models 6 summary rows

Region 217-5446 models · 6 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_sp_Q6ZNA1_ZN836_HUMAN:356:407_1llm_C_1	1llm	356-407	View model · PDB
Predicted = Low	TFS_sp_Q6ZNA1_ZN836_HUMAN:217:493_5v3j_E_1	5v3j	217-493	View model · PDB
Predicted = Low	TFS_sp_Q6ZNA1_ZN836_HUMAN:217:493_5v3m_C_1	5v3m	217-493	View model · PDB
Predicted = Low	TFS_sp_Q6ZNA1_ZN836_HUMAN:242:521_5wjq_D_1	5wjq	242-521	View model · PDB
Predicted = Low	TFS_sp_Q6ZNA1_ZN836_HUMAN:246:544_7w1m_H_1	7w1m	246-544	View model · PDB
Predicted = Low	TFS_sp_Q6ZNA1_ZN836_HUMAN:283:436_2i13_A_1	2i13	283-436	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
5	2i13	217:546	283	436	P:A · DNA:C,D	60.4% / 68.8%	100	View · PDB TFS_sp_Q6ZNA1_ZN836_HUMAN:283:436_2i13_A_1
1	5wjq	217:546	242	521	P:D · DNA:A,B	53.6% / 70.0%	99	View · PDB TFS_sp_Q6ZNA1_ZN836_HUMAN:242:521_5wjq_D_1
2	5v3m	217:546	217	493	P:C · DNA:A,B	52.0% / 67.9%	100	View · PDB TFS_sp_Q6ZNA1_ZN836_HUMAN:217:493_5v3m_C_1
3	5v3j	217:546	217	493	P:E · DNA:A,B	52.0% / 67.9%	100	View · PDB TFS_sp_Q6ZNA1_ZN836_HUMAN:217:493_5v3j_E_1
1	1llm	217:546	356,356	407,407	P:C,D · DNA:A,B	44.2% / 67.3%	59,61	View · PDB DIMER_sp_Q6ZNA1_ZN836_HUMAN:356:407_1llm_C_1
4	7w1m	217:546	246	544	P:H · DNA:F,G	38.6% / 52.9%	92	View · PDB TFS_sp_Q6ZNA1_ZN836_HUMAN:246:544_7w1m_H_1

Region 747-8571 model

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	TFS_sp_Q6ZNA1_ZN836_HUMAN:747:857_5ei9_E_1	5ei9	747-857	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
7-48	PF01352	KRAB box	No overlap with loaded model regions
218-240	PF00096	Zinc finger, C2H2 type	overlaps 217-544
246-268	PF00096	Zinc finger, C2H2 type	overlaps 217-544
274-296	PF00096	Zinc finger, C2H2 type	overlaps 217-544
302-324	PF00096	Zinc finger, C2H2 type	overlaps 217-544
330-352	PF00096	Zinc finger, C2H2 type	overlaps 217-544
358-380	PF00096	Zinc finger, C2H2 type	overlaps 217-544
386-408	PF00096	Zinc finger, C2H2 type	overlaps 217-544
414-436	PF00096	Zinc finger, C2H2 type	overlaps 217-544
442-464	PF00096	Zinc finger, C2H2 type	overlaps 217-544
470-492	PF00096	Zinc finger, C2H2 type	overlaps 217-544
498-520	PF00096	Zinc finger, C2H2 type	overlaps 217-544
526-548	PF00096	Zinc finger, C2H2 type	overlaps 217-544
554-576	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
582-604	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
610-632	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
638-660	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
666-688	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
722-744	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
750-772	PF00096	Zinc finger, C2H2 type	overlaps 747-857
778-800	PF00096	Zinc finger, C2H2 type	overlaps 747-857
806-828	PF00096	Zinc finger, C2H2 type	overlaps 747-857
834-856	PF00096	Zinc finger, C2H2 type	overlaps 747-857
862-884	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
890-912	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions