ModCRE DB

Transcription factor

Q6ZNB4

cDNA FLJ16242 fis, clone HCASM2009424

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 153 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)8
MotifPredictionSourceDNA bindingSupportLogoActions
M05727_2.00 NN 70-40% CisBP GGTTGCTAGGCGTTGCTAG 53.1% identity Open · Scan
MA0510.1 NN 70-40% JASPAR CTCCCTGGCAACAGC 53.1% identity Open · Scan
M02454_2.00 NN 70-40% CisBP CGTTGCTAAG 52.6% identity Open · Scan
MA0509.2 NN 70-40% JASPAR CTGTTGCTATGGCA 51.0% identity Open · Scan
M00709_2.00 NN 70-40% CisBP GGTTGCTATG 50.8% identity Open · Scan
MA0509.1 NN 70-40% JASPAR GTTGCCATGGCAAC 50.8% identity Open · Scan
M05721_2.00 NN 70-40% CisBP CGTTGCCATGGCAACG 50.0% identity Open · Scan
MA0799.1 NN 70-40% JASPAR CGTTGCCATGGCAACG 50.0% identity Open · Scan
ModCRE1
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_Q6ZNB4_Q6ZNB4_HUMAN:85:115_7q94_B_1 ModCRE Homology model GGCAGT Region 85-115 · 1 3D model Open · Scan

No DNA-interacting structure identified

None of the 1 assessable structural model contains a protein–DNA non-hydrogen atom contact within 4.5 Å.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 153 aa
85-115

Region 85-115 1 PWM

Residues
31 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB · 1 summary row
Templates
7Q94
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model 1 summary row
Region 85-1151 model · 1 summary row
Actions
Predicted = Low TFS_tr_Q6ZNB4_Q6ZNB4_HUMAN:85:115_7q94_B_1 7q94 85-115 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 7q94 85:115 85 115 P:B · DNA:C,D 32.3% / 51.6% 11 View · PDB TFS_tr_Q6ZNB4_Q6ZNB4_HUMAN:85:115_7q94_B_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
1-54PF02257RFX DNA-binding domainNo overlap with loaded model regions