Region 193-220 3 PWM
- Residues
- 28 aa
- Domains
- No overlapping PFAM annotation recorded
- 3D models
- 3 active PDBs · 3 summary rows
- Templates
- 1UBD, 6E93, 6E94
- Sources
- Predicted = Low
Transcription factor
Q6ZNC4 - ZNF704
Zinc finger protein 704
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 412 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M04519_2.00 | Known | CisBP | CGCCGGCCGGCG | Direct PWM | Open · Scan | |
| M04520_2.00 | Known | CisBP | CGCCGGCCGGCG | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE4
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_sp_Q6ZNC4_ZN704_HUMAN:193:220_1ubd_C_1 | ModCRE | Homology model | GGGGCGAAGCGT | Region 193-220 · 1 3D model | Open · Scan | |
| TFS_sp_Q6ZNC4_ZN704_HUMAN:198:220_6e93_A_1 | ModCRE | Homology model | CGGGGGCTCTGGG | Region 198-220 · 1 3D model | Open · Scan | |
| TFS_sp_Q6ZNC4_ZN704_HUMAN:198:220_6e94_A_1 | ModCRE | Homology model | TGAACACAGCCGA | Region 198-220 · 1 3D model | Open · Scan | |
| TFS_sp_Q6ZNC4_ZN704_HUMAN:380:412_7dta_A_1 | ModCRE | Homology model | GCGACGCGTCC | Region 380-412 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
412 aa
193-220
380-412
Region 380-412 1 PWM
- Residues
- 33 aa
- Domains
- PF27556 · Zinc finger protein 704 C-terminal domain
- 3D models
- 1 active PDB · 1 summary row
- Templates
- 7DTA
- Sources
- Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
4 active PDB models
4 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 193-2203 models · 3 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_sp_Q6ZNC4_ZN704_HUMAN:193:220_1ubd_C_1 | 1ubd | 193-220 | View model · PDB |
| Predicted = Low | TFS_sp_Q6ZNC4_ZN704_HUMAN:198:220_6e93_A_1 | 6e93 | 198-220 | View model · PDB |
| Predicted = Low | TFS_sp_Q6ZNC4_ZN704_HUMAN:198:220_6e94_A_1 | 6e94 | 198-220 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 2 | 6e93 | 380:412 | 198 | 220 | P:A · DNA:C,D | 52.2% / 60.9% | 19 | View · PDB TFS_sp_Q6ZNC4_ZN704_HUMAN:198:220_6e93_A_1 |
| 3 | 6e94 | 380:412 | 198 | 220 | P:A · DNA:C,D | 47.8% / 60.9% | 19 | View · PDB TFS_sp_Q6ZNC4_ZN704_HUMAN:198:220_6e94_A_1 |
| 4 | 1ubd | 380:412 | 193 | 220 | P:C · DNA:A,B | 39.3% / 60.7% | 23 | View · PDB TFS_sp_Q6ZNC4_ZN704_HUMAN:193:220_1ubd_C_1 |
Region 380-4121 model · 1 summary row
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_sp_Q6ZNC4_ZN704_HUMAN:380:412_7dta_A_1 | 7dta | 380-412 | View model · PDB |
Model-summary evidence imported for this region.
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 379-412 | PF27556 | Zinc finger protein 704 C-terminal domain | overlaps 380-412 |