ModCRE DB

Transcription factor

Q6ZNG0 - ZNF620

Zinc finger protein 620

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 422 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07648_2.00 Known CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 422 aa
9-41

Region 9-41 0 PWM

Residues
33 aa
Domains
PF01352 · KRAB box
3D models
1 active PDB
Templates
1RAM
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 9-411 model
Actions
Predicted = Low DIMER_Q6ZNG0:9:41_1ram_B_1 1ram 9-41 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
10-50PF01352KRAB boxoverlaps 9-41
224-246PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
252-274PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
280-302PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
308-330PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
350-375PF13465Zinc-finger double domainNo overlap with loaded model regions