ModCRE DB

Transcription factor

Q6ZNG1 - ZNF600

Zinc finger protein 600

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 722 aa

74 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07759_2.00 NN 70+% CisBP GGAGCGCCCCTGCCCGGC 88.2% identity Open · Scan
Nearest Neighbor (70% - 40%)73
MotifPredictionSourceDNA bindingSupportLogoActions
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 68.4% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 67.2% identity Open · Scan
M07701_2.00 NN 70-40% CisBP CCTGGGCTAGGCCCTGGC 65.8% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 63.8% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 63.4% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 62.3% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 62.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.1% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 61.1% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 61.1% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 61.1% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 61.1% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 61.1% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 60.0% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 59.9% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 59.8% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 59.6% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 59.4% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 59.2% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 58.8% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.4% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 58.4% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 57.4% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 57.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 57.2% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 57.0% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.5% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 56.5% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 56.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 55.9% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 55.6% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 55.3% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 54.9% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 54.3% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 54.3% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 54.0% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.0% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 53.9% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 53.5% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 53.4% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 53.4% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 53.1% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 53.0% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 53.0% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 52.9% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 52.7% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 52.6% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 52.2% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 52.1% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 52.1% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 52.1% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 52.0% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 51.9% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 51.7% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 51.6% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 51.5% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 51.5% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 51.3% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 51.3% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 51.1% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 51.1% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 51.0% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 50.9% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 50.8% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 50.8% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 50.6% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 50.4% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.4% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 50.2% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 50.1% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 722 aa
245-406

Region 245-406 0 PWM

Residues
162 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 245-4061 model
Actions
Predicted = Low TFS_Q6ZNG1:245:406_5t0u_A_1 5t0u 245-406 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
218-240PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
246-268PF00096Zinc finger, C2H2 typeoverlaps 245-406
274-296PF00096Zinc finger, C2H2 typeoverlaps 245-406
302-324PF00096Zinc finger, C2H2 typeoverlaps 245-406
330-352PF00096Zinc finger, C2H2 typeoverlaps 245-406
358-380PF00096Zinc finger, C2H2 typeoverlaps 245-406
386-408PF00096Zinc finger, C2H2 typeoverlaps 245-406
414-436PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
498-520PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
554-576PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
582-604PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
610-632PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
638-660PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
666-684PF12874Zinc-finger of C2H2 typeNo overlap with loaded model regions
694-716PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions