ModCRE DB

Transcription factor

Q6ZR52 - ZNF493

Zinc finger protein 493

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 646 aa

97 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 78.5% identity Open · Scan
M08295_2.00 NN 70+% CisBP CTGCTGGAATCTCCA 70.4% identity Open · Scan
Nearest Neighbor (70% - 40%)95
MotifPredictionSourceDNA bindingSupportLogoActions
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 68.3% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 67.4% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 66.6% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 66.6% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 65.4% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 64.2% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 63.8% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 63.7% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 63.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.0% identity Open · Scan
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 62.9% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 62.7% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 62.5% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 61.9% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 61.9% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 61.9% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 61.9% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 61.9% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 61.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 61.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 60.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 60.5% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 60.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 59.5% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 59.3% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 58.7% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 58.6% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 58.5% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 58.2% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 57.9% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 57.2% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 57.1% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 57.0% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.9% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 56.7% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 56.3% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 55.9% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 55.8% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 55.6% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 55.5% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 55.4% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 55.3% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 55.1% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.0% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 54.9% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 54.9% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 54.8% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 54.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 54.6% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 54.6% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 54.4% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 54.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 54.2% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 54.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.9% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 53.9% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 53.8% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 53.5% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 53.4% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 53.4% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 53.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.9% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 52.8% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 52.8% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 52.8% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 52.5% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 52.4% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 52.2% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 52.2% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 51.8% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 51.8% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.7% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 51.6% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 51.5% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 51.4% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.4% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 51.4% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 51.4% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 51.4% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.3% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 51.2% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 51.2% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 51.2% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 51.2% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 51.0% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 50.9% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 50.6% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 50.6% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 50.5% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.2% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 50.2% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 50.0% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 50.0% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 50.0% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 646 aa
246-524

Region 246-524 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 246-5241 model
Actions
Predicted = Low TFS_Q6ZR52:246:524_5wjq_D_1 5wjq 246-524 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
82-104PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
113-131PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
137-159PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
249-271PF00096Zinc finger, C2H2 typeoverlaps 246-524
277-299PF00096Zinc finger, C2H2 typeoverlaps 246-524
305-327PF00096Zinc finger, C2H2 typeoverlaps 246-524
333-355PF00096Zinc finger, C2H2 typeoverlaps 246-524
361-383PF00096Zinc finger, C2H2 typeoverlaps 246-524
389-411PF00096Zinc finger, C2H2 typeoverlaps 246-524
417-439PF00096Zinc finger, C2H2 typeoverlaps 246-524
445-467PF00096Zinc finger, C2H2 typeoverlaps 246-524
473-495PF00096Zinc finger, C2H2 typeoverlaps 246-524
501-523PF00096Zinc finger, C2H2 typeoverlaps 246-524
529-551PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
557-579PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
585-607PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
613-635PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions