ModCRE DB

Transcription factor

Q6ZS01

cDNA FLJ45938 fis, clone PLACE7005169, moderately similar to Mus musculus zinc finger protein 292 (Zfp292)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1345 aa

5 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_Q6ZS01_Q6ZS01_HUMAN:313:425_5egb_A_1 ModCRE Homology model ACGGGCCGCGCCGGGGGG Region 313-425 · 1 3D model Open · Scan
TFS_tr_Q6ZS01_Q6ZS01_HUMAN:313:425_5ei9_E_1 ModCRE Homology model GGCCCGGGGCGGGCTCT Region 313-425 · 1 3D model Open · Scan
TFS_tr_Q6ZS01_Q6ZS01_HUMAN:316:425_5eh2_F_1 ModCRE Homology model AGGGCCACGGAGTGGGTAC Region 316-425 · 1 3D model Open · Scan
TFS_tr_Q6ZS01_Q6ZS01_HUMAN:317:425_5wjq_D_1 ModCRE Homology model GGCGCCCCCCCCCGGCCCCC Region 317-425 · 1 3D model Open · Scan
TFS_tr_Q6ZS01_Q6ZS01_HUMAN:320:424_6wmi_A_1 ModCRE Homology model CTTGCGTAGCCTATTGA Region 320-424 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1345 aa
313-425

Region 313-425 5 PWM

Residues
113 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 5EGB, 5EH2, 5EI9, 5WJQ, 6WMI
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 313-4256 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q6ZS01_Q6ZS01_HUMAN:317:345_1llm_C_1 1llm 317-345 View model · PDB
Predicted = Low TFS_tr_Q6ZS01_Q6ZS01_HUMAN:313:425_5egb_A_1 5egb 313-425 View model · PDB
Predicted = Low TFS_tr_Q6ZS01_Q6ZS01_HUMAN:313:425_5ei9_E_1 5ei9 313-425 View model · PDB
Predicted = Low TFS_tr_Q6ZS01_Q6ZS01_HUMAN:316:425_5eh2_F_1 5eh2 316-425 View model · PDB
Predicted = Low TFS_tr_Q6ZS01_Q6ZS01_HUMAN:317:425_5wjq_D_1 5wjq 317-425 View model · PDB
Predicted = Low TFS_tr_Q6ZS01_Q6ZS01_HUMAN:320:424_6wmi_A_1 6wmi 320-424 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 273:425 317,317 345,345 P:C,D · DNA:A,B 41.4% / 58.6% 33,34 View · PDB DIMER_tr_Q6ZS01_Q6ZS01_HUMAN:317:345_1llm_C_1
5 5wjq 273:425 317 425 P:D · DNA:A,B 32.7% / 48.2% 37 View · PDB TFS_tr_Q6ZS01_Q6ZS01_HUMAN:317:425_5wjq_D_1
1 5ei9 273:425 313 425 P:E · DNA:A,B 29.2% / 46.9% 99 View · PDB TFS_tr_Q6ZS01_Q6ZS01_HUMAN:313:425_5ei9_E_1
2 5egb 273:425 313 425 P:A · DNA:C,D 29.2% / 46.9% 99 View · PDB TFS_tr_Q6ZS01_Q6ZS01_HUMAN:313:425_5egb_A_1
4 5eh2 273:425 316 425 P:F · DNA:C,D 29.1% / 47.3% 98 View · PDB TFS_tr_Q6ZS01_Q6ZS01_HUMAN:316:425_5eh2_F_1
3 6wmi 273:425 320 424 P:A · DNA:E,F 28.3% / 41.5% 71 View · PDB TFS_tr_Q6ZS01_Q6ZS01_HUMAN:320:424_6wmi_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
2-62PF25580Zinc finger protein Rlf-like, TPR repeatsNo overlap with loaded model regions
124-156PF25420ZN292-like C2H2 zinc fingerNo overlap with loaded model regions
400-424PF00096Zinc finger, C2H2 typeoverlaps 313-425