ModCRE DB

Transcription factor

Q6ZSB9 - ZBTB49

Zinc finger and BTB domain-containing protein 49 (Zinc finger protein 509)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 765 aa

39 Generated PWM 10 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M02901_2.00 Known CisBP TTTCGCCTGGCACGTCA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)29
MotifPredictionSourceDNA bindingSupportLogoActions
M00943_2.00 NN 70-40% CisBP CCCGCTGC 56.4% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 56.4% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 55.2% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 54.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 54.1% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 52.9% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 52.9% identity Open · Scan
M04595_2.00 NN 70-40% CisBP GTTTCCGGTAAC 52.6% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 52.6% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 52.6% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 52.6% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 52.3% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 52.3% identity Open · Scan
M02108_2.00 NN 70-40% CisBP CCTAATTAG 52.1% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 51.7% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 51.7% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 51.7% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 51.4% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 51.2% identity Open · Scan
M01439_2.00 NN 70-40% CisBP TTACGCCACA 51.0% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 51.0% identity Open · Scan
M01199_2.00 NN 70-40% CisBP GCGCCACC 50.9% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 50.5% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 50.3% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 50.2% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.0% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 50.0% identity Open · Scan
MA0038.1 NN 70-40% JASPAR CAAATCACTG 50.0% identity Open · Scan
MA0038.2 NN 70-40% JASPAR CAAATCACTGCA 50.0% identity Open · Scan
ModCRE9
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q6ZSB9_ZBT49_HUMAN:379:585_5v3j_E_1 ModCRE Homology model ACGCCCCGGGGAACCCGAAAGGGAGC Region 379-585 · 1 3D model Open · Scan
TFS_sp_Q6ZSB9_ZBT49_HUMAN:379:585_5v3m_C_1 ModCRE Homology model CCCGGGGGGGGGGAGGGGTTTGGAAA Region 379-585 · 1 3D model Open · Scan
TFS_sp_Q6ZSB9_ZBT49_HUMAN:393:585_5wjq_D_1 ModCRE Homology model TCGGGGGGGGGGGGGGAATGTTAGGGC Region 393-585 · 1 3D model Open · Scan
TFS_sp_Q6ZSB9_ZBT49_HUMAN:395:502_5eh2_F_1 ModCRE Homology model CGGGGGCCCGGTGGACAGA Region 395-502 · 1 3D model Open · Scan
TFS_sp_Q6ZSB9_ZBT49_HUMAN:423:502_2kmk_A_1 ModCRE Homology model GGAGTCGCGATAGGGG Region 423-502 · 1 3D model Open · Scan
TFS_sp_Q6ZSB9_ZBT49_HUMAN:432:585_2i13_A_1 ModCRE Homology model CCACGCCTTCTTGCACCCCCA Region 432-585 · 1 3D model Open · Scan
TFS_sp_Q6ZSB9_ZBT49_HUMAN:447:587_6ml7_A_1 ModCRE Homology model TACACCCTTACGCCAAAAA Region 447-587 · 1 3D model Open · Scan
TFS_sp_Q6ZSB9_ZBT49_HUMAN:476:585_5egb_A_1 ModCRE Homology model CCCGGGGGGGGGGGGCGT Region 476-585 · 1 3D model Open · Scan
TFS_sp_Q6ZSB9_ZBT49_HUMAN:476:585_5ei9_E_1 ModCRE Homology model CCCCGGCCCCGGGGGCC Region 476-585 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 765 aa
379-587

Region 379-587 9 PWM

Residues
209 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
10 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 2KMK, 5EGB, 5EH2, 5EI9, 5V3J, 5V3M, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
10 active PDB models 6 summary rows
Region 379-58710 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q6ZSB9_ZBT49_HUMAN:421:469_1llm_D_1 1llm 421-469 View model · PDB
Predicted = Low TFS_sp_Q6ZSB9_ZBT49_HUMAN:379:585_5v3j_E_1 5v3j 379-585 View model · PDB
Predicted = Low TFS_sp_Q6ZSB9_ZBT49_HUMAN:379:585_5v3m_C_1 5v3m 379-585 View model · PDB
Predicted = Low TFS_sp_Q6ZSB9_ZBT49_HUMAN:393:585_5wjq_D_1 5wjq 393-585 View model · PDB
Predicted = Low TFS_sp_Q6ZSB9_ZBT49_HUMAN:395:502_5eh2_F_1 5eh2 395-502 View model · PDB
Predicted = Low TFS_sp_Q6ZSB9_ZBT49_HUMAN:423:502_2kmk_A_1 2kmk 423-502 View model · PDB
Predicted = Low TFS_sp_Q6ZSB9_ZBT49_HUMAN:432:585_2i13_A_1 2i13 432-585 View model · PDB
Predicted = Low TFS_sp_Q6ZSB9_ZBT49_HUMAN:447:587_6ml7_A_1 6ml7 447-587 View model · PDB
Predicted = Low TFS_sp_Q6ZSB9_ZBT49_HUMAN:476:585_5egb_A_1 5egb 476-585 View model · PDB
Predicted = Low TFS_sp_Q6ZSB9_ZBT49_HUMAN:476:585_5ei9_E_1 5ei9 476-585 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 354:593 421,421 469,469 P:C,D · DNA:A,B 53.1% / 81.6% 56,57 View · PDB DIMER_sp_Q6ZSB9_ZBT49_HUMAN:421:469_1llm_D_1
4 2i13 354:593 432 585 P:A · DNA:C,D 47.4% / 61.0% 100 View · PDB TFS_sp_Q6ZSB9_ZBT49_HUMAN:432:585_2i13_A_1
5 6ml7 354:593 447 587 P:A · DNA:E,F 44.7% / 58.2% 98 View · PDB TFS_sp_Q6ZSB9_ZBT49_HUMAN:447:587_6ml7_A_1
3 5wjq 354:593 393 585 P:D · DNA:A,B 44.0% / 60.1% 68 View · PDB TFS_sp_Q6ZSB9_ZBT49_HUMAN:393:585_5wjq_D_1
1 5v3m 354:593 379 585 P:C · DNA:A,B 41.5% / 59.4% 74 View · PDB TFS_sp_Q6ZSB9_ZBT49_HUMAN:379:585_5v3m_C_1
2 5v3j 354:593 379 585 P:E · DNA:A,B 41.5% / 59.4% 74 View · PDB TFS_sp_Q6ZSB9_ZBT49_HUMAN:379:585_5v3j_E_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
15-119PF00651BTB/POZ domainNo overlap with loaded model regions
395-417PF00096Zinc finger, C2H2 typeoverlaps 379-587
423-445PF00096Zinc finger, C2H2 typeoverlaps 379-587
451-473PF00096Zinc finger, C2H2 typeoverlaps 379-587
481-501PF00096Zinc finger, C2H2 typeoverlaps 379-587
506-529PF13912C2H2-type zinc fingeroverlaps 379-587
535-557PF00096Zinc finger, C2H2 typeoverlaps 379-587
563-585PF00096Zinc finger, C2H2 typeoverlaps 379-587