ModCRE DB

Transcription factor

Q6ZSZ6 - TSHZ1

Teashirt homolog 1 (Antigen NY-CO-33) (Serologically defined colon cancer antigen 33)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1077 aa

3 Generated PWM 9 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE3
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q6ZSZ6_TSH1_HUMAN:965:994_5eh2_F_1 ModCRE Homology model CACAGGTGCCCT Region 965-994 · 1 3D model Open · Scan
TFS_sp_Q6ZSZ6_TSH1_HUMAN:970:994_6e93_A_1 ModCRE Homology model GTCACCGAGG Region 970-994 · 1 3D model Open · Scan
TFS_sp_Q6ZSZ6_TSH1_HUMAN:970:994_6e94_A_1 ModCRE Homology model AACCACGTGG Region 970-994 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1077 aa
242-437
965-995
1037-1064

Region 242-437 0 PWM

Residues
196 aa
Domains
No overlapping PFAM annotation recorded
3D models
3 active PDBs · 3 summary rows
Templates
5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
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Region 965-995 3 PWM

Residues
31 aa
Domains
No overlapping PFAM annotation recorded
3D models
5 active PDBs · 2 summary rows
Templates
4GZN, 4M9V, 5EH2, 6E93, 6E94
Sources
Predicted = Low
Scan this region Show models

Region 1037-1064 0 PWM

Residues
28 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB · 1 summary row
Templates
1LLM
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
9 active PDB models 6 summary rows
Region 242-4373 models · 3 summary rows
Actions
Predicted = Low TFS_sp_Q6ZSZ6_TSH1_HUMAN:242:437_5v3j_E_1 5v3j 242-437 View model · PDB
Predicted = Low TFS_sp_Q6ZSZ6_TSH1_HUMAN:242:437_5v3m_C_1 5v3m 242-437 View model · PDB
Predicted = Low TFS_sp_Q6ZSZ6_TSH1_HUMAN:246:437_5wjq_D_1 5wjq 246-437 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 5v3m 230:437 242 437 P:C · DNA:A,B 19.6% / 37.2% 68 View · PDB TFS_sp_Q6ZSZ6_TSH1_HUMAN:242:437_5v3m_C_1
2 5v3j 230:437 242 437 P:E · DNA:A,B 19.6% / 37.2% 68 View · PDB TFS_sp_Q6ZSZ6_TSH1_HUMAN:242:437_5v3j_E_1
3 5wjq 230:437 246 437 P:D · DNA:A,B 19.5% / 37.4% 66 View · PDB TFS_sp_Q6ZSZ6_TSH1_HUMAN:246:437_5wjq_D_1
Region 965-9955 models · 2 summary rows
Actions
Predicted = Low TFS_sp_Q6ZSZ6_TSH1_HUMAN:965:994_5eh2_F_1 5eh2 965-994 View model · PDB
Predicted = Low TFS_sp_Q6ZSZ6_TSH1_HUMAN:970:994_6e93_A_1 6e93 970-994 View model · PDB
Predicted = Low TFS_sp_Q6ZSZ6_TSH1_HUMAN:970:994_6e94_A_1 6e94 970-994 View model · PDB
Predicted = Low TFS_sp_Q6ZSZ6_TSH1_HUMAN:970:995_4gzn_C_1 4gzn 970-995 View model · PDB
Predicted = Low TFS_sp_Q6ZSZ6_TSH1_HUMAN:970:995_4m9v_C_1 4m9v 970-995 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 4gzn 230:437 970 995 P:C · DNA:A,B 46.2% / 53.8% 44 View · PDB TFS_sp_Q6ZSZ6_TSH1_HUMAN:970:995_4gzn_C_1
5 4m9v 230:437 970 995 P:C · DNA:A,B 46.2% / 53.8% 44 View · PDB TFS_sp_Q6ZSZ6_TSH1_HUMAN:970:995_4m9v_C_1
Region 1037-10641 model · 1 summary row
Actions
Predicted = Low DIMER_sp_Q6ZSZ6_TSH1_HUMAN:1037:1064_1llm_D_1 1llm 1037-1064 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 230:437 1037,1037 1064,1064 P:C,D · DNA:A,B 32.1% / 53.6% 32,32 View · PDB DIMER_sp_Q6ZSZ6_TSH1_HUMAN:1037:1064_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
893-957PF26094Teashirt homolog 3-like, homeodomainNo overlap with loaded model regions