Region 115-229 0 PWM
- Residues
- 115 aa
- Domains
- PF00249 · Myb-like DNA-binding domain PF00249 · Myb-like DNA-binding domain PF00249 · Myb-like DNA-binding domain
- 3D models
- 1 active PDB
- Templates
- 1H89
- Sources
- Structure model
Transcription factor
Q708J0 - c-myb
Transcriptional activator Myb
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 678 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
678 aa
115-229
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 115-2291 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_Q708J0:115:229_1h89_C_1 | 1h89 | 115-229 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 78-124 | PF00249 | Myb-like DNA-binding domain | overlaps 115-229 |
| 130-176 | PF00249 | Myb-like DNA-binding domain | overlaps 115-229 |
| 182-225 | PF00249 | Myb-like DNA-binding domain | overlaps 115-229 |
| 306-351 | PF07988 | LMSTEN motif | No overlap with loaded model regions |
| 436-594 | PF09316 | C-myb, C-terminal | No overlap with loaded model regions |