Region 172-281 0 PWM
- Residues
- 110 aa
- Domains
- PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
- 3D models
- 1 active PDB
- Templates
- 5EGB
- Sources
- Structure model
Transcription factor
Q7L3S4 - ZNF771
Zinc finger protein 771 (Mesenchymal stem cell protein DSC43)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 317 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known4
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M04590_2.00 | Known | CisBP | TGCGCTAACCATTGC | Direct PWM | Open · Scan | |
| M04589_2.00 | Known | CisBP | TGCGCTAACCATTGT | Direct PWM | Open · Scan | |
| M04591_2.00 | Known | CisBP | AGCGCTAACCATTGT | Direct PWM | Open · Scan | |
| M04592_2.00 | Known | CisBP | TGCGCTAACCACTGC | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
317 aa
172-281
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 172-2811 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_Q7L3S4:172:281_5egb_A_1 | 5egb | 172-281 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 63-85 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 93-113 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 119-141 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 147-169 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 175-197 | PF00096 | Zinc finger, C2H2 type | overlaps 172-281 |
| 203-225 | PF00096 | Zinc finger, C2H2 type | overlaps 172-281 |
| 231-253 | PF00096 | Zinc finger, C2H2 type | overlaps 172-281 |
| 259-281 | PF00096 | Zinc finger, C2H2 type | overlaps 172-281 |