ModCRE DB

Transcription factor

Q7RTS3 - PTF1A

Pancreas transcription factor 1 subunit alpha (Class A basic helix-loop-helix protein 29) (bHLHa29) (Pancreas-specific transcription factor 1a) (bHLH transcription factor p48) (p48 DNA-binding subunit of transcription factor PTF1) (PTF1-p48)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 328 aa

4 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known4
MotifPredictionSourceDNA bindingSupportLogoActions
M04156_2.00 Known CisBP AACAGCTGACGC Direct PWM Open · Scan
M04157_2.00 Known CisBP AACAGCTGACGC Direct PWM Open · Scan
M08736_2.00 Known CisBP CCAGCTGCCCCCTTTCCC Direct PWM Open · Scan
PTF1A_HUMAN.H11MO.0.B Known HOCOMOCO CCAGCTGCCCCCTTTCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 328 aa
165-212

Region 165-212 0 PWM

Residues
48 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1NKP
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 165-2121 model
Actions
Predicted = Low DIMER_Q7RTS3:165:212_1nkp_A_1 1nkp 165-212 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
165-215PF00010Helix-loop-helix DNA-binding domainoverlaps 165-212