ModCRE DB

Transcription factor

Q7RTU0 - TCF24

Transcription factor 24 (TCF-24)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 167 aa

13 Generated PWM 3 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)10
MotifPredictionSourceDNA bindingSupportLogoActions
M03606_2.00 NN 70-40% CisBP CCACACGACGCA 53.0% identity Open · Scan
M00756_2.00 NN 70-40% CisBP CGCAGCTGTG 50.9% identity Open · Scan
MA0048.1 NN 70-40% JASPAR GCGCAGCTGCGT 50.9% identity Open · Scan
MA0092.1 NN 70-40% JASPAR GGTCTGGCAT 50.9% identity Open · Scan
MA1529.1 NN 70-40% JASPAR GGGCCGCAGCTGCGTCCC 50.9% identity Open · Scan
MA0665.1 NN 70-40% JASPAR AACAGCTGTT 50.6% identity Open · Scan
MA0832.1 NN 70-40% JASPAR GCAACAGCTGTTGT 50.6% identity Open · Scan
MA1568.1 NN 70-40% JASPAR CACCATATGGCG 50.6% identity Open · Scan
MA1468.1 NN 70-40% JASPAR AACATATGTC 50.0% identity Open · Scan
MA1638.1 NN 70-40% JASPAR ACCAGATGGC 50.0% identity Open · Scan
ModCRE3
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q7RTU0_TCF24_HUMAN:56:106_2ql2_B_1 ModCRE Homology model GTGCCCATATGTTTAA Region 56-106 · 1 3D model Open · Scan
TFS_sp_Q7RTU0_TCF24_HUMAN:56:107_2ypb_A_1 ModCRE Homology model ACCCATGGGGT Region 56-107 · 1 3D model Open · Scan
TFS_sp_Q7RTU0_TCF24_HUMAN:56:110_2ypa_A_1 ModCRE Homology model ACACATGTGGG Region 56-110 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 167 aa
56-110

Region 56-110 3 PWM

Residues
55 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
3 active PDBs · 3 summary rows
Templates
2QL2, 2YPA, 2YPB
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
3 active PDB models 3 summary rows
Region 56-1103 models · 3 summary rows
Actions
Predicted = Low TFS_sp_Q7RTU0_TCF24_HUMAN:56:106_2ql2_B_1 2ql2 56-106 View model · PDB
Predicted = Low TFS_sp_Q7RTU0_TCF24_HUMAN:56:107_2ypb_A_1 2ypb 56-107 View model · PDB
Predicted = Low TFS_sp_Q7RTU0_TCF24_HUMAN:56:110_2ypa_A_1 2ypa 56-110 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
2 2ypb 56:110 56 107 P:A · DNA:E,F 48.1% / 65.4% 77 View · PDB TFS_sp_Q7RTU0_TCF24_HUMAN:56:107_2ypb_A_1
1 2ypa 56:110 56 110 P:A · DNA:E,F 47.3% / 63.6% 82 View · PDB TFS_sp_Q7RTU0_TCF24_HUMAN:56:110_2ypa_A_1
3 2ql2 56:110 56 106 P:B · DNA:E,F 39.2% / 56.9% 86 View · PDB TFS_sp_Q7RTU0_TCF24_HUMAN:56:106_2ql2_B_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
53-102PF00010Helix-loop-helix DNA-binding domainoverlaps 56-110