ModCRE DB

Transcription factor

Q7RTV3 - ZNF367

Zinc finger protein 367 (C2H2 zinc finger protein ZFF29)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 350 aa

67 Generated PWM 12 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)55
MotifPredictionSourceDNA bindingSupportLogoActions
M08239_2.00 NN 70-40% CisBP GGGCCGCTCTAGGCTGCCGG 62.2% identity Open · Scan
MA1580.1 NN 70-40% JASPAR TGTACAGTAT 58.3% identity Open · Scan
M01445_2.00 NN 70-40% CisBP ACACGCCGT 56.9% identity Open · Scan
M03663_2.00 NN 70-40% CisBP TTTAACCCTTTC 56.6% identity Open · Scan
M06112_2.00 NN 70-40% CisBP CTACTTTCACCGGGG 55.5% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 54.6% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 54.2% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 53.9% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 53.9% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 53.9% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 53.6% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 53.5% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 53.3% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 53.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 53.1% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 53.1% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 53.1% identity Open · Scan
MA0088.1 NN 70-40% JASPAR GATTTCCCATAATGCCTTGC 53.0% identity Open · Scan
MA0863.1 NN 70-40% JASPAR TTTGCACACGGCAC 53.0% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 52.8% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 52.6% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 52.4% identity Open · Scan
M08233_2.00 NN 70-40% CisBP CCCCTGCTGGG 52.4% identity Open · Scan
M09013_2.00 NN 70-40% CisBP GGCCCCCTGCTGTGA 52.4% identity Open · Scan
MA0696.1 NN 70-40% JASPAR GACCCCCCGCTGTG 52.4% identity Open · Scan
MA0697.1 NN 70-40% JASPAR GACCCCCCGCTGCGC 52.4% identity Open · Scan
MA1628.1 NN 70-40% JASPAR CACAGCAGGGG 52.4% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 52.3% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 52.3% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 52.3% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 52.3% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 52.1% identity Open · Scan
M08966_2.00 NN 70-40% CisBP CCAGCGCCCCCTGGTGGCCA 51.6% identity Open · Scan
MA0139.1 NN 70-40% JASPAR TGGCCACCAGGGGGCGCTA 51.6% identity Open · Scan
M00769_2.00 NN 70-40% CisBP ACTCCCCC 51.5% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 51.5% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 51.5% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 51.5% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 51.5% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 51.4% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.8% identity Open · Scan
M08089_2.00 NN 70-40% CisBP GGTGCCCCCTGGTG 50.8% identity Open · Scan
MA1102.1 NN 70-40% JASPAR CACCAGGGGGCACC 50.8% identity Open · Scan
M00621_2.00 NN 70-40% CisBP CCCGCTGTGA 50.7% identity Open · Scan
M08301_2.00 NN 70-40% CisBP CTCCCATCC 50.7% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 50.7% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 50.6% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 50.0% identity Open · Scan
M03677_2.00 NN 70-40% CisBP TGCTACCGTGTTACGCA 50.0% identity Open · Scan
M04587_2.00 NN 70-40% CisBP GTACCTACCGC 50.0% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 50.0% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 50.0% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.0% identity Open · Scan
M08312_2.00 NN 70-40% CisBP ATTGGGTTTCTGTTGCTT 50.0% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 50.0% identity Open · Scan
ModCRE12
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_Q7RTV3_ZN367_HUMAN:168:216_1llm_D_1 ModCRE Homology model TGGGACGGGGGG Region 168-216 · 1 3D model Open · Scan
TFS_sp_Q7RTV3_ZN367_HUMAN:168:246_2i13_A_1 ModCRE Homology model TTACTGCAGATGTTTAT Region 168-246 · 1 3D model Open · Scan
TFS_sp_Q7RTV3_ZN367_HUMAN:169:219_3uk3_C_1 ModCRE Homology model CCAAGCAGACG Region 169-219 · 1 3D model Open · Scan
TFS_sp_Q7RTV3_ZN367_HUMAN:169:219_3uk3_D_1 ModCRE Homology model TGTCTCCTTG Region 169-219 · 1 3D model Open · Scan
TFS_sp_Q7RTV3_ZN367_HUMAN:169:219_4is1_C_1 ModCRE Homology model CCAACGTGACG Region 169-219 · 1 3D model Open · Scan
TFS_sp_Q7RTV3_ZN367_HUMAN:169:219_4is1_D_1 ModCRE Homology model CGTTTCCTGG Region 169-219 · 1 3D model Open · Scan
TFS_sp_Q7RTV3_ZN367_HUMAN:172:232_6wmi_A_1 ModCRE Homology model GGGGCCCTCCCTTTG Region 172-232 · 1 3D model Open · Scan
TFS_sp_Q7RTV3_ZN367_HUMAN:172:246_2jp9_A_1 ModCRE Homology model GAGCGGGCCGGGGCCCG Region 172-246 · 1 3D model Open · Scan
TFS_sp_Q7RTV3_ZN367_HUMAN:172:246_2jpa_A_1 ModCRE Homology model GCCGGGGCCCGGCC Region 172-246 · 1 3D model Open · Scan
TFS_sp_Q7RTV3_ZN367_HUMAN:172:246_2prt_A_1 ModCRE Homology model CCCCCCCCGGTC Region 172-246 · 1 3D model Open · Scan
TFS_sp_Q7RTV3_ZN367_HUMAN:172:246_5keb_A_1 ModCRE Homology model CGGGGGCTGG Region 172-246 · 1 3D model Open · Scan
TFS_sp_Q7RTV3_ZN367_HUMAN:172:246_6b0o_A_1 ModCRE Homology model ACCCCGGGGGCC Region 172-246 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 350 aa
168-246

Region 168-246 12 PWM

Residues
79 aa
Domains
PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type
3D models
12 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 2JP9, 2JPA, 2PRT, 3UK3, 4IS1, 5KEB, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
12 active PDB models 6 summary rows
Region 168-24612 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q7RTV3_ZN367_HUMAN:168:216_1llm_D_1 1llm 168-216 View model · PDB
Predicted = Low TFS_sp_Q7RTV3_ZN367_HUMAN:168:246_2i13_A_1 2i13 168-246 View model · PDB
Predicted = Low TFS_sp_Q7RTV3_ZN367_HUMAN:169:219_3uk3_C_1 3uk3 169-219 View model · PDB
Predicted = Low TFS_sp_Q7RTV3_ZN367_HUMAN:169:219_3uk3_D_1 3uk3 169-219 View model · PDB
Predicted = Low TFS_sp_Q7RTV3_ZN367_HUMAN:169:219_4is1_C_1 4is1 169-219 View model · PDB
Predicted = Low TFS_sp_Q7RTV3_ZN367_HUMAN:169:219_4is1_D_1 4is1 169-219 View model · PDB
Predicted = Low TFS_sp_Q7RTV3_ZN367_HUMAN:172:232_6wmi_A_1 6wmi 172-232 View model · PDB
Predicted = Low TFS_sp_Q7RTV3_ZN367_HUMAN:172:246_2jp9_A_1 2jp9 172-246 View model · PDB
Predicted = Low TFS_sp_Q7RTV3_ZN367_HUMAN:172:246_2jpa_A_1 2jpa 172-246 View model · PDB
Predicted = Low TFS_sp_Q7RTV3_ZN367_HUMAN:172:246_2prt_A_1 2prt 172-246 View model · PDB
Predicted = Low TFS_sp_Q7RTV3_ZN367_HUMAN:172:246_5keb_A_1 5keb 172-246 View model · PDB
Predicted = Low TFS_sp_Q7RTV3_ZN367_HUMAN:172:246_6b0o_A_1 6b0o 172-246 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
2 6wmi 159:250 172 232 P:A · DNA:E,F 49.2% / 65.6% 41 View · PDB TFS_sp_Q7RTV3_ZN367_HUMAN:172:232_6wmi_A_1
1 2i13 159:250 168 246 P:A · DNA:C,D 47.5% / 60.0% 50 View · PDB TFS_sp_Q7RTV3_ZN367_HUMAN:168:246_2i13_A_1
3 2jpa 159:250 172 246 P:A · DNA:B,C 47.4% / 56.6% 63 View · PDB TFS_sp_Q7RTV3_ZN367_HUMAN:172:246_2jpa_A_1
4 2jp9 159:250 172 246 P:A · DNA:B,C 47.4% / 56.6% 63 View · PDB TFS_sp_Q7RTV3_ZN367_HUMAN:172:246_2jp9_A_1
5 6b0o 159:250 172 246 P:A · DNA:B,C 47.4% / 56.6% 63 View · PDB TFS_sp_Q7RTV3_ZN367_HUMAN:172:246_6b0o_A_1
1 1llm 159:250 168,168 216,216 P:C,D · DNA:A,B 46.9% / 61.2% 54,55 View · PDB DIMER_sp_Q7RTV3_ZN367_HUMAN:168:216_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
168-189PF13912C2H2-type zinc fingeroverlaps 168-246
196-219PF00096Zinc finger, C2H2 typeoverlaps 168-246