Transcription factor

Q7Z340 - ZNF551

Zinc finger protein 551 (Zinc finger protein KOX23)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 670 aa

101 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)95

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	67.0% identity		Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	67.0% identity		Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	65.8% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	65.0% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	64.7% identity		Open · Scan
M04613_2.00	NN 70-40%	CisBP	CTCATGTGCTAATTACAAA	64.1% identity		Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	63.5% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	63.5% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	63.5% identity		Open · Scan
M02924_2.00	NN 70-40%	CisBP	AGTGTTAACAGAACACCT	63.4% identity		Open · Scan
M08887_2.00	NN 70-40%	CisBP	CCTCCTCCAGGAAGCCTTCCCTGA	62.5% identity		Open · Scan
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	62.3% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	62.3% identity		Open · Scan
M08859_2.00	NN 70-40%	CisBP	CATTTTTTCCTCCTAGGCCT	61.8% identity		Open · Scan
M07613_2.00	NN 70-40%	CisBP	TCACTCAGTCATTCA	61.7% identity		Open · Scan
M04465_2.00	NN 70-40%	CisBP	GTGATTCTTATCTTATCCTT	61.4% identity		Open · Scan
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	61.1% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	61.1% identity		Open · Scan
M08985_2.00	NN 70-40%	CisBP	TGAGGACCTACTGTGTGCC	61.0% identity		Open · Scan
MA1154.1	NN 70-40%	JASPAR	CTTTCCCACAACACGAC	60.8% identity		Open · Scan
M04611_2.00	NN 70-40%	CisBP	CTTTCGGACAC	60.7% identity		Open · Scan
M04650_2.00	NN 70-40%	CisBP	GCATAACTGCCCCGCTGCC	60.1% identity		Open · Scan
M04653_2.00	NN 70-40%	CisBP	GGTACGGTTGTCCATGTTGCAA	59.3% identity		Open · Scan
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	58.8% identity		Open · Scan
M07635_2.00	NN 70-40%	CisBP	AAGTTTTCTTGTATTATATCT	58.5% identity		Open · Scan
M07689_2.00	NN 70-40%	CisBP	ACCCAGGCTCCTTCCATCTTGTGGCTC	58.3% identity		Open · Scan
MA1124.1	NN 70-40%	JASPAR	CATTCATTCATTC	57.6% identity		Open · Scan
M07656_2.00	NN 70-40%	CisBP	TGTCTAGTAAGTCTA	57.4% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	57.3% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	57.2% identity		Open · Scan
M07646_2.00	NN 70-40%	CisBP	CTTTTTTTT	57.1% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	57.1% identity		Open · Scan
M08373_2.00	NN 70-40%	CisBP	CCCCCTGGCTCTTCCTCT	57.1% identity		Open · Scan
M08274_2.00	NN 70-40%	CisBP	TTACTTGCAGCCCAACGCATTCCTAAC	57.0% identity		Open · Scan
M00786_2.00	NN 70-40%	CisBP	TATATATAT	56.6% identity		Open · Scan
M08263_2.00	NN 70-40%	CisBP	ATCTCGGCACTTTGGGAGGCCA	56.6% identity		Open · Scan
M04610_2.00	NN 70-40%	CisBP	CGGCGACGCGAACAC	56.5% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	56.2% identity		Open · Scan
M07700_2.00	NN 70-40%	CisBP	ATGTTGTGAGGAAGCCCA	56.1% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	55.8% identity		Open · Scan
M08392_2.00	NN 70-40%	CisBP	CTTCACCTGCTGAGG	55.8% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	55.4% identity		Open · Scan
MA1589.1	NN 70-40%	JASPAR	TAGGAGTGGAATTGCTGGGTC	55.4% identity		Open · Scan
M08375_2.00	NN 70-40%	CisBP	TTCCCCATTGGCTACTGCACCGGTCCT	55.2% identity		Open · Scan
M08901_2.00	NN 70-40%	CisBP	CCAGTTCACACC	55.0% identity		Open · Scan
M04536_2.00	NN 70-40%	CisBP	ACGTAACCCGATACC	54.6% identity		Open · Scan
M08267_2.00	NN 70-40%	CisBP	CAGTTTCATTTTCC	54.3% identity		Open · Scan
M07582_2.00	NN 70-40%	CisBP	TCCCTG	54.2% identity		Open · Scan
M08309_2.00	NN 70-40%	CisBP	AAAAACCCCCCTGCAGAGCCCAGCCCT	54.2% identity		Open · Scan
M00609_2.00	NN 70-40%	CisBP	GGAAGCCCTA	54.1% identity		Open · Scan
M08395_2.00	NN 70-40%	CisBP	GCTGCCTACTCTTCC	54.1% identity		Open · Scan
M07610_2.00	NN 70-40%	CisBP	CCTTCTTCCTCCCCCCTGCCCACC	54.0% identity		Open · Scan
M07620_2.00	NN 70-40%	CisBP	TTGGATCTGTGGATTCATGTCTTTCAT	53.9% identity		Open · Scan
M08949_2.00	NN 70-40%	CisBP	TTCTATTTCTTCTTGTGTCA	53.7% identity		Open · Scan
MA1656.1	NN 70-40%	JASPAR	CCAAGCCCAACCAG	53.7% identity		Open · Scan
M07683_2.00	NN 70-40%	CisBP	GTGGGAAAGCCT	53.6% identity		Open · Scan
M07712_2.00	NN 70-40%	CisBP	ACATTTTTTTAATCTAAAAAAACATTTACA	53.6% identity		Open · Scan
M08371_2.00	NN 70-40%	CisBP	CCAGACTTGTCCTCT	53.6% identity		Open · Scan
MA1601.1	NN 70-40%	JASPAR	ATGTGGGAAA	53.6% identity		Open · Scan
M07685_2.00	NN 70-40%	CisBP	CTTTCCAGCCAC	53.5% identity		Open · Scan
M07753_2.00	NN 70-40%	CisBP	TGCATTCCTTGGCTTGTG	53.5% identity		Open · Scan
M07618_2.00	NN 70-40%	CisBP	CCTTTGGTGCTC	53.2% identity		Open · Scan
MA1600.1	NN 70-40%	JASPAR	ATACAGTCCACCCCTTTA	53.2% identity		Open · Scan
M08311_2.00	NN 70-40%	CisBP	CTGGAACAGAAGGGGCGA	53.0% identity		Open · Scan
M07581_2.00	NN 70-40%	CisBP	TCCCCTGTGCTTCTCTCCCCT	52.7% identity		Open · Scan
M08944_2.00	NN 70-40%	CisBP	TACCATGCTGTTTTGATTAC	52.7% identity		Open · Scan
MA1592.1	NN 70-40%	JASPAR	GGTATGAGTTCTCGCT	52.6% identity		Open · Scan
M08334_2.00	NN 70-40%	CisBP	TTTGTTTTTTTCTGATTGCTTTTTACTTAT	52.5% identity		Open · Scan
MA0056.1	NN 70-40%	JASPAR	TGGGGA	52.4% identity		Open · Scan
M04505_2.00	NN 70-40%	CisBP	AGCTTTTCCCACAC	52.3% identity		Open · Scan
MA0528.1	NN 70-40%	JASPAR	GGAGGAGGAGGGGGAGGAGGA	52.2% identity		Open · Scan
M07605_2.00	NN 70-40%	CisBP	TATTTTTTTTTATTTTTTTTTTTTTTTTTT	52.0% identity		Open · Scan
M07562_2.00	NN 70-40%	CisBP	GAAAAAAAC	51.9% identity		Open · Scan
M07566_2.00	NN 70-40%	CisBP	TCAAACCATCCTTGC	51.9% identity		Open · Scan
M08234_2.00	NN 70-40%	CisBP	GTCAACTTGACTGGGCCA	51.8% identity		Open · Scan
M03671_2.00	NN 70-40%	CisBP	ATTACCATACAAGTGCAC	51.6% identity		Open · Scan
M07687_2.00	NN 70-40%	CisBP	ACAAATAAGGTTCTTGTGCCCCCTGCT	51.6% identity		Open · Scan
MA1596.1	NN 70-40%	JASPAR	GCCTCAGCCTCCCGAG	51.5% identity		Open · Scan
M07587_2.00	NN 70-40%	CisBP	CCCCCTCCCCAGTCGAGCCCCCGC	51.1% identity		Open · Scan
M08917_2.00	NN 70-40%	CisBP	GCTGAGCCATGTGGGGTGCT	51.0% identity		Open · Scan
M07648_2.00	NN 70-40%	CisBP	GCTTGCAAAAAAAATTTAACTCCCAGCTC	50.9% identity		Open · Scan
M07701_2.00	NN 70-40%	CisBP	CCTGGGCTAGGCCCTGGC	50.9% identity		Open · Scan
M08312_2.00	NN 70-40%	CisBP	ATTGGGTTTCTGTTGCTT	50.9% identity		Open · Scan
M04598_2.00	NN 70-40%	CisBP	CGCTAACTCTCCACA	50.7% identity		Open · Scan
M05844_2.00	NN 70-40%	CisBP	TCACCTGT	50.6% identity		Open · Scan
M05853_2.00	NN 70-40%	CisBP	CCACCTTTAGCCATATCT	50.6% identity		Open · Scan
MA0103.1	NN 70-40%	JASPAR	CACCTG	50.6% identity		Open · Scan
MA0103.2	NN 70-40%	JASPAR	CCTCACCTG	50.6% identity		Open · Scan
M00945_2.00	NN 70-40%	CisBP	CACCGCAC	50.5% identity		Open · Scan
M07667_2.00	NN 70-40%	CisBP	CCGCACAGGCCCCCGGGCCCC	50.5% identity		Open · Scan
M08314_2.00	NN 70-40%	CisBP	ATTCATCAAGGTCCTCAACAATGG	50.5% identity		Open · Scan
M07588_2.00	NN 70-40%	CisBP	TCCTTCCCTCTTTCC	50.4% identity		Open · Scan
M08254_2.00	NN 70-40%	CisBP	CTGCCCTGGGACTTT	50.2% identity		Open · Scan
M08342_2.00	NN 70-40%	CisBP	GCTCTGCCTCCCTCT	50.1% identity		Open · Scan
M01457_2.00	NN 70-40%	CisBP	GCGCACGGAC	50.0% identity		Open · Scan

ModCRE6

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
DIMER_sp_Q7Z340_ZN551_HUMAN:473:524_1llm_D_1	ModCRE	Homology model	GTGCGCGGCGGA	Region 473-524 · 1 3D model		Open · Scan
TFS_sp_Q7Z340_ZN551_HUMAN:251:358_5egb_A_1	ModCRE	Homology model	GGGCGCGCAGGGGGGGTC	Region 251-358 · 1 3D model		Open · Scan
TFS_sp_Q7Z340_ZN551_HUMAN:251:358_5eh2_F_1	ModCRE	Homology model	TCTACAGGCCCGGCGGGAAA	Region 251-358 · 1 3D model		Open · Scan
TFS_sp_Q7Z340_ZN551_HUMAN:251:358_5ei9_E_1	ModCRE	Homology model	CCCCAGGGCCGGCGGGC	Region 251-358 · 1 3D model		Open · Scan
TFS_sp_Q7Z340_ZN551_HUMAN:256:329_1a1g_A_1	ModCRE	Homology model	GGGAAACGTG	Region 256-329 · 1 3D model		Open · Scan
TFS_sp_Q7Z340_ZN551_HUMAN:279:358_2kmk_A_1	ModCRE	Homology model	TCGGGGGAGGGGGGGC	Region 279-358 · 1 3D model		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 670 aa

251-358

362-666

Region 251-358 5 PWM

Residues

108 aa

Domains

PF00096 · Zinc finger, C2H2 type

3D models

5 active PDBs

Templates

1A1G, 2KMK, 5EGB, 5EH2, 5EI9

Sources

Predicted = Low

Scan this region Show models

Region 362-666 1 PWM

Residues

305 aa

Domains

PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

6 active PDBs · 6 summary rows

Templates

1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

11 active PDB models 6 summary rows

Region 251-3585 models

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	TFS_sp_Q7Z340_ZN551_HUMAN:251:358_5egb_A_1	5egb	251-358	View model · PDB
Predicted = Low	TFS_sp_Q7Z340_ZN551_HUMAN:251:358_5eh2_F_1	5eh2	251-358	View model · PDB
Predicted = Low	TFS_sp_Q7Z340_ZN551_HUMAN:251:358_5ei9_E_1	5ei9	251-358	View model · PDB
Predicted = Low	TFS_sp_Q7Z340_ZN551_HUMAN:256:329_1a1g_A_1	1a1g	256-329	View model · PDB
Predicted = Low	TFS_sp_Q7Z340_ZN551_HUMAN:279:358_2kmk_A_1	2kmk	279-358	View model · PDB

Region 362-6666 models · 6 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_sp_Q7Z340_ZN551_HUMAN:473:524_1llm_D_1	1llm	473-524	View model · PDB
Predicted = Low	TFS_sp_Q7Z340_ZN551_HUMAN:362:638_5v3j_E_1	5v3j	362-638	View model · PDB
Predicted = Low	TFS_sp_Q7Z340_ZN551_HUMAN:362:638_5v3m_C_1	5v3m	362-638	View model · PDB
Predicted = Low	TFS_sp_Q7Z340_ZN551_HUMAN:363:661_7w1m_H_1	7w1m	363-661	View model · PDB
Predicted = Low	TFS_sp_Q7Z340_ZN551_HUMAN:388:666_5wjq_D_1	5wjq	388-666	View model · PDB
Predicted = Low	TFS_sp_Q7Z340_ZN551_HUMAN:484:637_2i13_A_1	2i13	484-637	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
4	2i13	360:669	484	637	P:A · DNA:C,D	60.4% / 73.4%	100	View · PDB TFS_sp_Q7Z340_ZN551_HUMAN:484:637_2i13_A_1
1	5wjq	360:669	388	666	P:D · DNA:A,B	51.3% / 72.8%	99	View · PDB TFS_sp_Q7Z340_ZN551_HUMAN:388:666_5wjq_D_1
2	5v3m	360:669	362	638	P:C · DNA:A,B	50.9% / 71.5%	100	View · PDB TFS_sp_Q7Z340_ZN551_HUMAN:362:638_5v3m_C_1
3	5v3j	360:669	362	638	P:E · DNA:A,B	50.9% / 71.5%	100	View · PDB TFS_sp_Q7Z340_ZN551_HUMAN:362:638_5v3j_E_1
1	1llm	360:669	473,473	524,524	P:C,D · DNA:A,B	42.3% / 61.5%	59,61	View · PDB DIMER_sp_Q7Z340_ZN551_HUMAN:473:524_1llm_D_1
5	7w1m	360:669	363	661	P:H · DNA:F,G	36.0% / 55.8%	92	View · PDB TFS_sp_Q7Z340_ZN551_HUMAN:363:661_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
29-69	PF01352	KRAB box	No overlap with loaded model regions
335-357	PF00096	Zinc finger, C2H2 type	overlaps 251-358
363-385	PF00096	Zinc finger, C2H2 type	overlaps 362-666
391-413	PF00096	Zinc finger, C2H2 type	overlaps 362-666
419-441	PF00096	Zinc finger, C2H2 type	overlaps 362-666
447-469	PF00096	Zinc finger, C2H2 type	overlaps 362-666
475-497	PF00096	Zinc finger, C2H2 type	overlaps 362-666
503-525	PF00096	Zinc finger, C2H2 type	overlaps 362-666
531-553	PF00096	Zinc finger, C2H2 type	overlaps 362-666
559-581	PF00096	Zinc finger, C2H2 type	overlaps 362-666
587-609	PF00096	Zinc finger, C2H2 type	overlaps 362-666
615-637	PF00096	Zinc finger, C2H2 type	overlaps 362-666
643-665	PF00096	Zinc finger, C2H2 type	overlaps 362-666