ModCRE DB

Transcription factor

Q7Z4V0 - ZNF438

Zinc finger protein 438

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 828 aa

10 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE10
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q7Z4V0_ZN438_HUMAN:504:578_7n5u_A_1 ModCRE Homology model TAGTTGTTACC Region 504-578 · 1 3D model Open · Scan
TFS_sp_Q7Z4V0_ZN438_HUMAN:507:557_5yj3_C_1 ModCRE Homology model ACCCC Region 507-557 · 1 3D model Open · Scan
TFS_sp_Q7Z4V0_ZN438_HUMAN:508:557_1a1i_A_1 ModCRE Homology model TCTCCGCCCC Region 508-557 · 1 3D model Open · Scan
TFS_sp_Q7Z4V0_ZN438_HUMAN:508:557_1a1k_A_1 ModCRE Homology model CCCGGGCACC Region 508-557 · 1 3D model Open · Scan
TFS_sp_Q7Z4V0_ZN438_HUMAN:508:578_8h9h_G_1 ModCRE Homology model AATTATCCCCCT Region 508-578 · 1 3D model Open · Scan
TFS_sp_Q7Z4V0_ZN438_HUMAN:509:558_3uk3_C_1 ModCRE Homology model CCATGGTGACA Region 509-558 · 1 3D model Open · Scan
TFS_sp_Q7Z4V0_ZN438_HUMAN:509:558_3uk3_D_1 ModCRE Homology model TGCGCCCCGG Region 509-558 · 1 3D model Open · Scan
TFS_sp_Q7Z4V0_ZN438_HUMAN:509:558_4is1_C_1 ModCRE Homology model CCGTGGTGATT Region 509-558 · 1 3D model Open · Scan
TFS_sp_Q7Z4V0_ZN438_HUMAN:509:558_4is1_D_1 ModCRE Homology model TGCGCCCCGC Region 509-558 · 1 3D model Open · Scan
TFS_sp_Q7Z4V0_ZN438_HUMAN:509:568_6ml3_A_1 ModCRE Homology model GGCCCCCCCCGGCAA Region 509-568 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 828 aa
504-578

Region 504-578 10 PWM

Residues
75 aa
Domains
No overlapping PFAM annotation recorded
3D models
11 active PDBs · 6 summary rows
Templates
1A1I, 1A1K, 1LLM, 3UK3, 4IS1, 5YJ3, 6ML3, 7N5U, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
11 active PDB models 6 summary rows
Region 504-57811 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q7Z4V0_ZN438_HUMAN:508:558_1llm_C_1 1llm 508-558 View model · PDB
Predicted = Low TFS_sp_Q7Z4V0_ZN438_HUMAN:504:578_7n5u_A_1 7n5u 504-578 View model · PDB
Predicted = Low TFS_sp_Q7Z4V0_ZN438_HUMAN:507:557_5yj3_C_1 5yj3 507-557 View model · PDB
Predicted = Low TFS_sp_Q7Z4V0_ZN438_HUMAN:508:557_1a1i_A_1 1a1i 508-557 View model · PDB
Predicted = Low TFS_sp_Q7Z4V0_ZN438_HUMAN:508:557_1a1k_A_1 1a1k 508-557 View model · PDB
Predicted = Low TFS_sp_Q7Z4V0_ZN438_HUMAN:508:578_8h9h_G_1 8h9h 508-578 View model · PDB
Predicted = Low TFS_sp_Q7Z4V0_ZN438_HUMAN:509:558_3uk3_C_1 3uk3 509-558 View model · PDB
Predicted = Low TFS_sp_Q7Z4V0_ZN438_HUMAN:509:558_3uk3_D_1 3uk3 509-558 View model · PDB
Predicted = Low TFS_sp_Q7Z4V0_ZN438_HUMAN:509:558_4is1_C_1 4is1 509-558 View model · PDB
Predicted = Low TFS_sp_Q7Z4V0_ZN438_HUMAN:509:558_4is1_D_1 4is1 509-558 View model · PDB
Predicted = Low TFS_sp_Q7Z4V0_ZN438_HUMAN:509:568_6ml3_A_1 6ml3 509-568 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 6ml3 481:593 509 568 P:A · DNA:E,F 36.7% / 55.0% 53 View · PDB TFS_sp_Q7Z4V0_ZN438_HUMAN:509:568_6ml3_A_1
2 8h9h 481:593 508 578 P:G · DNA:A,B 35.2% / 46.5% 82 View · PDB TFS_sp_Q7Z4V0_ZN438_HUMAN:508:578_8h9h_G_1
1 7n5u 481:593 504 578 P:A · DNA:X,Y 34.7% / 46.7% 86 View · PDB TFS_sp_Q7Z4V0_ZN438_HUMAN:504:578_7n5u_A_1
3 1a1k 481:593 508 557 P:A · DNA:B,C 34.0% / 54.0% 58 View · PDB TFS_sp_Q7Z4V0_ZN438_HUMAN:508:557_1a1k_A_1
4 1a1i 481:593 508 557 P:A · DNA:B,C 34.0% / 54.0% 58 View · PDB TFS_sp_Q7Z4V0_ZN438_HUMAN:508:557_1a1i_A_1
1 1llm 481:593 508,508 558,558 P:C,D · DNA:A,B 31.4% / 51.0% 58,60 View · PDB DIMER_sp_Q7Z4V0_ZN438_HUMAN:508:558_1llm_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Imported domain tags6
Mu-like_Comzf-C2H2zf-C2H2_2zf-C2H2_4zf-H2C2_2zf-met