ModCRE DB

Transcription factor

Q7Z6T9 - TBPL1

TATA-box binding protein like 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 45 aa

5 Generated PWM 5 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qn8_A_1 ModCRE Homology model GCCAAGCGCCGCG Region 13-40 · 1 3D model Open · Scan
TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qn9_A_1 ModCRE Homology model TCGGCCGGCCCCC Region 13-40 · 1 3D model Open · Scan
TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qna_A_1 ModCRE Homology model GCCAGGGACCGCG Region 13-40 · 1 3D model Open · Scan
TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qnb_A_1 ModCRE Homology model GCCAGGCGCCGCA Region 13-40 · 1 3D model Open · Scan
TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qnc_A_1 ModCRE Homology model GACCAATGCCCGCA Region 13-40 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 45 aa
13-40

Region 13-40 5 PWM

Residues
28 aa
Domains
PF00352 · Transcription factor TFIID (or TATA-binding protein, TBP)
3D models
5 active PDBs · 5 summary rows
Templates
1QN8, 1QN9, 1QNA, 1QNB, 1QNC
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models 5 summary rows
Region 13-405 models · 5 summary rows
Actions
Predicted = Low TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qn8_A_1 1qn8 13-40 View model · PDB
Predicted = Low TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qn9_A_1 1qn9 13-40 View model · PDB
Predicted = Low TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qna_A_1 1qna 13-40 View model · PDB
Predicted = Low TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qnb_A_1 1qnb 13-40 View model · PDB
Predicted = Low TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qnc_A_1 1qnc 13-40 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1qna 13:40 13 40 P:A · DNA:C,D 35.7% / 53.6% 15 View · PDB TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qna_A_1
2 1qnc 13:40 13 40 P:A · DNA:C,D 35.7% / 53.6% 15 View · PDB TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qnc_A_1
3 1qnb 13:40 13 40 P:A · DNA:C,D 35.7% / 53.6% 15 View · PDB TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qnb_A_1
4 1qn9 13:40 13 40 P:A · DNA:C,D 35.7% / 53.6% 15 View · PDB TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qn9_A_1
5 1qn8 13:40 13 40 P:A · DNA:C,D 35.7% / 53.6% 15 View · PDB TFS_tr_Q7Z6T9_Q7Z6T9_HUMAN:13:40_1qn8_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
11-43PF00352Transcription factor TFIID (or TATA-binding protein, TBP)overlaps 13-40