ModCRE DB

Transcription factor

Q86T29 - ZNF605

Zinc finger protein 605

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 641 aa

63 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07704_2.00 Known CisBP CACTATGGTCTCTATGCCCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)56
MotifPredictionSourceDNA bindingSupportLogoActions
M00944_2.00 NN 70-40% CisBP TCGCTATAA 68.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 68.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 67.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 65.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 64.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 64.2% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 63.8% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 63.6% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.5% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 62.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 61.1% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 61.1% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 60.8% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 60.1% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 60.0% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 60.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 60.0% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 59.8% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 59.5% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 59.3% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 58.9% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 58.6% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 57.6% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 57.3% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 57.0% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 56.8% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 56.8% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 56.7% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 56.6% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 56.5% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 56.5% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 56.2% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 55.9% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 55.5% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 55.4% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 55.3% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 55.2% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 55.0% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 54.8% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 53.2% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 53.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.9% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 52.8% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 52.6% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 52.1% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 52.0% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 51.7% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 51.6% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.9% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.7% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 50.7% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.6% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 50.0% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.0% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 50.0% identity Open · Scan
MA1580.1 NN 70-40% JASPAR TGTACAGTAT 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_Q86T29_ZN605_HUMAN:223:272_1llm_D_1 ModCRE Homology model TCCCGGCCGCAA Region 223-272 · 1 3D model Open · Scan
TFS_sp_Q86T29_ZN605_HUMAN:178:331_2i13_A_1 ModCRE Homology model ACCCGCCTGCCCAAGCCTCCC Region 178-331 · 1 3D model Open · Scan
TFS_sp_Q86T29_ZN605_HUMAN:224:500_5v3j_E_1 ModCRE Homology model CCCACCCCTTCGCCGGTCCCCTTTCC Region 224-500 · 1 3D model Open · Scan
TFS_sp_Q86T29_ZN605_HUMAN:224:500_5v3m_C_1 ModCRE Homology model GGGCCCCCCCGCGCCCCGGACGCCCC Region 224-500 · 1 3D model Open · Scan
TFS_sp_Q86T29_ZN605_HUMAN:250:528_5wjq_D_1 ModCRE Homology model GGGCCCACCCCCGCCCGGGGCCCCCGGG Region 250-528 · 1 3D model Open · Scan
TFS_sp_Q86T29_ZN605_HUMAN:337:638_7w1m_H_1 ModCRE Homology model AACCGGCGCGCCCGAACGGGTGTCCCCCCGGGTGGCGCGCCCA Region 337-638 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 641 aa
178-638

Region 178-638 6 PWM

Residues
461 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 178-6386 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q86T29_ZN605_HUMAN:223:272_1llm_D_1 1llm 223-272 View model · PDB
Predicted = Low TFS_sp_Q86T29_ZN605_HUMAN:178:331_2i13_A_1 2i13 178-331 View model · PDB
Predicted = Low TFS_sp_Q86T29_ZN605_HUMAN:224:500_5v3j_E_1 5v3j 224-500 View model · PDB
Predicted = Low TFS_sp_Q86T29_ZN605_HUMAN:224:500_5v3m_C_1 5v3m 224-500 View model · PDB
Predicted = Low TFS_sp_Q86T29_ZN605_HUMAN:250:528_5wjq_D_1 5wjq 250-528 View model · PDB
Predicted = Low TFS_sp_Q86T29_ZN605_HUMAN:337:638_7w1m_H_1 7w1m 337-638 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 169:638 178 331 P:A · DNA:C,D 60.4% / 72.7% 100 View · PDB TFS_sp_Q86T29_ZN605_HUMAN:178:331_2i13_A_1
1 5wjq 169:638 250 528 P:D · DNA:A,B 52.0% / 66.7% 99 View · PDB TFS_sp_Q86T29_ZN605_HUMAN:250:528_5wjq_D_1
2 5v3m 169:638 224 500 P:C · DNA:A,B 52.0% / 66.1% 100 View · PDB TFS_sp_Q86T29_ZN605_HUMAN:224:500_5v3m_C_1
3 5v3j 169:638 224 500 P:E · DNA:A,B 52.0% / 66.1% 100 View · PDB TFS_sp_Q86T29_ZN605_HUMAN:224:500_5v3j_E_1
1 1llm 169:638 223,223 272,272 P:C,D · DNA:A,B 48.0% / 60.0% 57,58 View · PDB DIMER_sp_Q86T29_ZN605_HUMAN:223:272_1llm_D_1
5 7w1m 169:638 337 638 P:H · DNA:F,G 37.0% / 53.1% 93 View · PDB TFS_sp_Q86T29_ZN605_HUMAN:337:638_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
6-45PF01352KRAB boxNo overlap with loaded model regions
169-191PF00096Zinc finger, C2H2 typeoverlaps 178-638
197-219PF00096Zinc finger, C2H2 typeoverlaps 178-638
227-247PF00096Zinc finger, C2H2 typeoverlaps 178-638
255-275PF00096Zinc finger, C2H2 typeoverlaps 178-638
281-303PF00096Zinc finger, C2H2 typeoverlaps 178-638
309-331PF00096Zinc finger, C2H2 typeoverlaps 178-638
339-359PF00096Zinc finger, C2H2 typeoverlaps 178-638
365-387PF00096Zinc finger, C2H2 typeoverlaps 178-638
393-415PF00096Zinc finger, C2H2 typeoverlaps 178-638
449-471PF00096Zinc finger, C2H2 typeoverlaps 178-638
477-499PF00096Zinc finger, C2H2 typeoverlaps 178-638
505-527PF00096Zinc finger, C2H2 typeoverlaps 178-638
533-555PF00096Zinc finger, C2H2 typeoverlaps 178-638
589-611PF00096Zinc finger, C2H2 typeoverlaps 178-638
619-639PF00096Zinc finger, C2H2 typeoverlaps 178-638