ModCRE DB

Transcription factor

Q86TG7 - PEG10

Retrotransposon-derived protein PEG10 (Embryonal carcinoma differentiation-regulated protein) (Mammalian retrotransposon-derived protein 2) (Myelin expression factor 3-like protein 1) (MEF3-like protein 1) (Paternally expressed gene 10 protein) (Retrotransposon gag domain-containing protein 3) (Retrotransposon-derived gag-like polyprotein) (Ty3/Gypsy-like protein)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 708 aa

10 Generated PWM 10 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE10
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_1h88_B_1 ModCRE Homology model TACCTGGGCCGCTTTGTGG Region 4-53 · 1 3D model Open · Scan
DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_6mg1_B_1 ModCRE Homology model GGTCCAATTTGTGC Region 4-53 · 1 3D model Open · Scan
DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_6mg2_B_1 ModCRE Homology model CCGCGCGGGCGCCGGG Region 4-53 · 1 3D model Open · Scan
DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_6mg3_B_1 ModCRE Homology model CCCCCAAATGCCGGGG Region 4-53 · 1 3D model Open · Scan
DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_7l4v_B_1 ModCRE Homology model CGGGCGTTTGCGGGA Region 4-53 · 1 3D model Open · Scan
TFS_sp_Q86TG7_PEG10_HUMAN:4:53_1h88_B_1 ModCRE Homology model CCACAAAGGGGCCCAGGTA Region 4-53 · 1 3D model Open · Scan
TFS_sp_Q86TG7_PEG10_HUMAN:4:53_1h89_A_1 ModCRE Homology model AACACTTCCGCGCCACGTG Region 4-53 · 1 3D model Open · Scan
TFS_sp_Q86TG7_PEG10_HUMAN:4:53_1h89_B_1 ModCRE Homology model CAGCGCGGTTTAAAAG Region 4-53 · 1 3D model Open · Scan
TFS_sp_Q86TG7_PEG10_HUMAN:4:53_6mg2_B_1 ModCRE Homology model CCGCGCGGGCGCCGGG Region 4-53 · 1 3D model Open · Scan
TFS_sp_Q86TG7_PEG10_HUMAN:4:53_7l4v_B_1 ModCRE Homology model CGGGCGTTTGCGGGA Region 4-53 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 708 aa
4-53

Region 4-53 10 PWM

Residues
50 aa
Domains
No overlapping PFAM annotation recorded
3D models
10 active PDBs · 10 summary rows
Templates
1H88, 1H89, 6MG1, 6MG2, 6MG3, 7L4V
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
10 active PDB models 10 summary rows
Region 4-5310 models · 10 summary rows
Actions
Predicted = Low DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_1h88_B_1 1h88 4-53 View model · PDB
Predicted = Low DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_6mg1_B_1 6mg1 4-53 View model · PDB
Predicted = Low DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_6mg2_B_1 6mg2 4-53 View model · PDB
Predicted = Low DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_6mg3_B_1 6mg3 4-53 View model · PDB
Predicted = Low DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_7l4v_B_1 7l4v 4-53 View model · PDB
Predicted = Low TFS_sp_Q86TG7_PEG10_HUMAN:4:53_1h88_B_1 1h88 4-53 View model · PDB
Predicted = Low TFS_sp_Q86TG7_PEG10_HUMAN:4:53_1h89_A_1 1h89 4-53 View model · PDB
Predicted = Low TFS_sp_Q86TG7_PEG10_HUMAN:4:53_1h89_B_1 1h89 4-53 View model · PDB
Predicted = Low TFS_sp_Q86TG7_PEG10_HUMAN:4:53_6mg2_B_1 6mg2 4-53 View model · PDB
Predicted = Low TFS_sp_Q86TG7_PEG10_HUMAN:4:53_7l4v_B_1 7l4v 4-53 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1h88 4:53 4,4 53,53 P:A,B · DNA:D,E 32.0% / 56.0% 71,70 View · PDB TFS_sp_Q86TG7_PEG10_HUMAN:4:53_1h88_B_1
1 1h88 4:53 4,4 53,53 P:A,B · DNA:D,E 32.0% / 56.0% 71,70 View · PDB DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_1h88_B_1
2 1h89 4:53 4 53 P:B · DNA:D,E 32.0% / 56.0% 78 View · PDB TFS_sp_Q86TG7_PEG10_HUMAN:4:53_1h89_B_1
2 7l4v 4:53 4,4 45,53 P:A,B · DNA:C,D 32.0% / 56.0% 63,72 View · PDB DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_7l4v_B_1
3 1h89 4:53 4 53 P:A · DNA:D,E 32.0% / 56.0% 78 View · PDB TFS_sp_Q86TG7_PEG10_HUMAN:4:53_1h89_A_1
3 6mg2 4:53 4,4 45,53 P:A,B · DNA:C,D 32.0% / 56.0% 64,72 View · PDB DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_6mg2_B_1
4 7l4v 4:53 4,4 45,53 P:A,B · DNA:C,D 32.0% / 56.0% 63,72 View · PDB TFS_sp_Q86TG7_PEG10_HUMAN:4:53_7l4v_B_1
4 6mg3 4:53 4,4 45,53 P:A,B · DNA:C,D 32.0% / 56.0% 65,73 View · PDB DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_6mg3_B_1
5 6mg2 4:53 4,4 45,53 P:A,B · DNA:C,D 32.0% / 56.0% 64,72 View · PDB TFS_sp_Q86TG7_PEG10_HUMAN:4:53_6mg2_B_1
5 6mg1 4:53 4,4 53,53 P:A,B · DNA:C,D 32.0% / 56.0% 71,71 View · PDB DIMER_sp_Q86TG7_PEG10_HUMAN:4:53_6mg1_B_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
76-158PF16297RTL1/3-8/LDOC, capsid-like domainNo overlap with loaded model regions
167-241PF30901PEG10/RTL1, C-terminal capsid-like domainNo overlap with loaded model regions
367-474PF30863PEG10/RTL1 protease domainNo overlap with loaded model regions