Region 62-118 0 PWM
- Residues
- 57 aa
- Domains
- PF00010 · Helix-loop-helix DNA-binding domain
- 3D models
- 1 active PDB
- Templates
- 4H10
- Sources
- Structure model
Transcription factor
Q86TN1 - ARNT2
ARNT2 protein
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 217 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)4
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| MA1464.1 | NN 70+% | JASPAR | GTCACGTGCC | 99.5% identity | Open · Scan | |
| M01720_2.00 | NN 70+% | CisBP | GCACATGAAT | 99.0% identity | Open · Scan | |
| M06011_2.00 | NN 70+% | CisBP | GCACGTGAC | 79.4% identity | Open · Scan | |
| M08746_2.00 | NN 70+% | CisBP | GCACGTGA | 70.1% identity | Open · Scan |
Nearest Neighbor (70% - 40%)6
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| MA0259.1 | NN 70-40% | JASPAR | GGACGTGC | 67.0% identity | Open · Scan | |
| MA0004.1 | NN 70-40% | JASPAR | CACGTG | 66.5% identity | Open · Scan | |
| M04125_2.00 | NN 70-40% | CisBP | GTCACATGAC | 53.4% identity | Open · Scan | |
| M09478_2.00 | NN 70-40% | CisBP | CACGTGAC | 53.4% identity | Open · Scan | |
| MA0603.1 | NN 70-40% | JASPAR | GGTCACGTGC | 53.4% identity | Open · Scan | |
| M03615_2.00 | NN 70-40% | CisBP | GTCACGTGAC | 53.1% identity | Open · Scan |
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
217 aa
62-118
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 62-1181 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_Q86TN1:62:118_4h10_A_1 | 4h10 | 62-118 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 65-116 | PF00010 | Helix-loop-helix DNA-binding domain | overlaps 62-118 |
| 140-209 | PF00989 | PAS fold | No overlap with loaded model regions |