ModCRE DB

Transcription factor

Q86V71 - ZNF429

Zinc finger protein 429

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 674 aa

79 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M07714_2.00 NN 70+% CisBP AGCCCATTGGGGCCTATGCCC 92.8% identity Open · Scan
M00955_2.00 NN 70+% CisBP ACGTCCTCT 75.2% identity Open · Scan
M07715_2.00 NN 70+% CisBP CCGCCGCCGCCGTGG 70.5% identity Open · Scan
Nearest Neighbor (70% - 40%)76
MotifPredictionSourceDNA bindingSupportLogoActions
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 69.2% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 69.1% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 68.6% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 66.9% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 66.3% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 65.8% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 65.8% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 65.2% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 64.5% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.2% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 63.6% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.5% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 63.4% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 63.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.0% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 62.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 62.4% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.3% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 62.1% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 62.0% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 61.9% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 61.6% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 61.1% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 60.8% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 59.2% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 58.4% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 58.3% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 58.2% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 58.1% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 57.8% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 56.2% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 56.2% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 55.2% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 55.1% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.6% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 54.6% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 54.4% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 54.2% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 54.1% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 54.1% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 54.0% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 54.0% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 53.2% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.0% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 53.0% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 52.9% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 52.8% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 52.5% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.5% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 52.4% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 52.2% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 52.1% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.0% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 51.6% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 51.6% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 51.5% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 51.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 51.2% identity Open · Scan
M09515_2.00 NN 70-40% CisBP CCCGCCCACGCA 51.1% identity Open · Scan
MA0162.1 NN 70-40% JASPAR TGCGTGGGCGG 51.1% identity Open · Scan
MA0162.2 NN 70-40% JASPAR CCCCCGCCCCCGCC 51.1% identity Open · Scan
MA0472.1 NN 70-40% JASPAR CCCCCGCCCACGCAC 51.1% identity Open · Scan
MA0472.2 NN 70-40% JASPAR ACGCCCACGCA 51.1% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 51.0% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 50.9% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 50.9% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.8% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 50.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.4% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.3% identity Open · Scan
M06072_2.00 NN 70-40% CisBP CCACGCCCACGCAC 50.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 674 aa
256-366

Region 256-366 0 PWM

Residues
111 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
6E93
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 256-3661 model
Actions
Predicted = Low TFS_Q86V71:256:366_6e93_A_1 6e93 256-366 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
3-44PF01352KRAB boxNo overlap with loaded model regions
173-195PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
229-251PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
257-279PF00096Zinc finger, C2H2 typeoverlaps 256-366
285-307PF00096Zinc finger, C2H2 typeoverlaps 256-366
313-335PF00096Zinc finger, C2H2 typeoverlaps 256-366
341-363PF00096Zinc finger, C2H2 typeoverlaps 256-366
369-391PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
425-447PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
453-475PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
481-503PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
509-531PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
537-559PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
565-587PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
593-615PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
621-643PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions