ModCRE DB

Transcription factor

Q86XF7 - ZNF575

Zinc finger protein 575

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 245 aa

11 Generated PWM 12 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M01175_2.00 NN 70-40% CisBP TGGGGCTGAG 51.7% identity Open · Scan
ModCRE10
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q86XF7_ZN575_HUMAN:172:235_2i13_A_1 ModCRE Homology model AATAAGAGCAAAA Region 172-235 · 1 3D model Open · Scan
TFS_sp_Q86XF7_ZN575_HUMAN:172:235_2kmk_A_1 ModCRE Homology model CCTCTCAAGAGGAA Region 172-235 · 1 3D model Open · Scan
TFS_sp_Q86XF7_ZN575_HUMAN:175:235_5v3j_E_1 ModCRE Homology model GGCCCGGGGGGATA Region 175-235 · 1 3D model Open · Scan
TFS_sp_Q86XF7_ZN575_HUMAN:175:235_5v3m_C_1 ModCRE Homology model CCCACGGGAGGGGGA Region 175-235 · 1 3D model Open · Scan
TFS_sp_Q86XF7_ZN575_HUMAN:175:235_5wjq_D_1 ModCRE Homology model GGGGCTGGAGGAGAA Region 175-235 · 1 3D model Open · Scan
TFS_sp_Q86XF7_ZN575_HUMAN:52:235_5v3j_E_1 ModCRE Homology model GGGCCCCCCTCCCCCCCCGGGCT Region 52-235 · 1 3D model Open · Scan
TFS_sp_Q86XF7_ZN575_HUMAN:52:235_5v3m_C_1 ModCRE Homology model GGGCCCCCCCACCCCCCCGAGGCC Region 52-235 · 1 3D model Open · Scan
TFS_sp_Q86XF7_ZN575_HUMAN:52:235_5wjq_D_1 ModCRE Homology model GCCCCCCCCCGCGCCCCCGAAGGA Region 52-235 · 1 3D model Open · Scan
TFS_sp_Q86XF7_ZN575_HUMAN:61:199_2i13_A_1 ModCRE Homology model TTTGGGGAGGTTATACAGTAT Region 61-199 · 1 3D model Open · Scan
TFS_sp_Q86XF7_ZN575_HUMAN:61:235_8ssu_A_1 ModCRE Homology model ATTTTGTGCGTTCGCCCCC Region 61-235 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 245 aa
52-235

Region 52-235 10 PWM

Residues
184 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
12 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 2KMK, 5V3J, 5V3M, 5WJQ, 5YEF, 8SSU
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
12 active PDB models 6 summary rows
Region 52-23512 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q86XF7_ZN575_HUMAN:117:170_1llm_C_1 1llm 117-170 View model · PDB
Predicted = Low TFS_sp_Q86XF7_ZN575_HUMAN:172:235_2i13_A_1 2i13 172-235 View model · PDB
Predicted = Low TFS_sp_Q86XF7_ZN575_HUMAN:172:235_2kmk_A_1 2kmk 172-235 View model · PDB
Predicted = Low TFS_sp_Q86XF7_ZN575_HUMAN:175:235_5v3j_E_1 5v3j 175-235 View model · PDB
Predicted = Low TFS_sp_Q86XF7_ZN575_HUMAN:175:235_5v3m_C_1 5v3m 175-235 View model · PDB
Predicted = Low TFS_sp_Q86XF7_ZN575_HUMAN:175:235_5wjq_D_1 5wjq 175-235 View model · PDB
Predicted = Low TFS_sp_Q86XF7_ZN575_HUMAN:52:235_5v3j_E_1 5v3j 52-235 View model · PDB
Predicted = Low TFS_sp_Q86XF7_ZN575_HUMAN:52:235_5v3m_C_1 5v3m 52-235 View model · PDB
Predicted = Low TFS_sp_Q86XF7_ZN575_HUMAN:52:235_5wjq_D_1 5wjq 52-235 View model · PDB
Predicted = Low TFS_sp_Q86XF7_ZN575_HUMAN:61:199_2i13_A_1 2i13 61-199 View model · PDB
Predicted = Low TFS_sp_Q86XF7_ZN575_HUMAN:61:235_8ssu_A_1 8ssu 61-235 View model · PDB
Predicted = Low TFS_sp_Q86XF7_ZN575_HUMAN:62:235_5yef_G_1 5yef 62-235 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 52:235 61 199 P:A · DNA:C,D 43.2% / 59.0% 90 View · PDB TFS_sp_Q86XF7_ZN575_HUMAN:61:199_2i13_A_1
1 5wjq 52:235 52 235 P:D · DNA:A,B 38.6% / 54.9% 62 View · PDB TFS_sp_Q86XF7_ZN575_HUMAN:52:235_5wjq_D_1
2 5v3m 52:235 52 235 P:C · DNA:A,B 38.6% / 54.9% 62 View · PDB TFS_sp_Q86XF7_ZN575_HUMAN:52:235_5v3m_C_1
3 5v3j 52:235 52 235 P:E · DNA:A,B 38.6% / 54.9% 62 View · PDB TFS_sp_Q86XF7_ZN575_HUMAN:52:235_5v3j_E_1
5 8ssu 52:235 61 235 P:A · DNA:B,C 32.4% / 42.0% 72 View · PDB TFS_sp_Q86XF7_ZN575_HUMAN:61:235_8ssu_A_1
1 1llm 52:235 117,117 170,170 P:C,D · DNA:A,B 27.8% / 42.6% 62,63 View · PDB DIMER_sp_Q86XF7_ZN575_HUMAN:117:170_1llm_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
63-85PF00096Zinc finger, C2H2 typeoverlaps 52-235
91-113PF00096Zinc finger, C2H2 typeoverlaps 52-235
119-138PF00096Zinc finger, C2H2 typeoverlaps 52-235
147-169PF00096Zinc finger, C2H2 typeoverlaps 52-235
177-196PF00096Zinc finger, C2H2 typeoverlaps 52-235
213-235PF00096Zinc finger, C2H2 typeoverlaps 52-235