ModCRE DB

Transcription factor

Q86YG2

Similar to expressed sequence AI449432

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 622 aa

1 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
MA1154.1 Known JASPAR CTTTCCCACAACACGAC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 622 aa
460-605

Region 460-605 0 PWM

Residues
146 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 6ML2
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models
Region 460-6056 models
Actions
Predicted = Low DIMER_Q86YG2:523:574_1llm_D_1 1llm 523-574 View model · PDB
Predicted = Low TFS_Q86YG2:460:605_5v3j_E_1 5v3j 460-605 View model · PDB
Predicted = Low TFS_Q86YG2:460:605_5v3m_C_1 5v3m 460-605 View model · PDB
Predicted = Low TFS_Q86YG2:466:604_6ml2_A_1 6ml2 466-604 View model · PDB
Predicted = Low TFS_Q86YG2:467:603_2i13_A_1 2i13 467-603 View model · PDB
Predicted = Low TFS_Q86YG2:468:604_5wjq_D_1 5wjq 468-604 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
148-189PF01352KRAB boxNo overlap with loaded model regions
469-491PF00096Zinc finger, C2H2 typeoverlaps 460-605
525-547PF00096Zinc finger, C2H2 typeoverlaps 460-605
553-575PF00096Zinc finger, C2H2 typeoverlaps 460-605
581-603PF00096Zinc finger, C2H2 typeoverlaps 460-605