ModCRE DB

Transcription factor

Q8IVP9 - ZNF547

Zinc finger protein 547

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 402 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
M07600_2.00 Known CisBP GCATTAGC Direct PWM Open · Scan
MA2334.1 Known JASPAR TGCTAATGCAACA Direct PWM Open · Scan
M08315_2.00 Known CisBP GCCTGCTGCATTAGC Direct PWM Open · Scan
M08899_2.00 Known CisBP GTATGCCTGCTGCATTAGCA Direct PWM Open · Scan
ZN547_HUMAN.H11MO.0.C Known HOCOMOCO TGCTAATGCAGCAGGCATAC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 402 aa
146-401

Region 146-401 0 PWM

Residues
256 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 146-4011 model
Actions
Predicted = Low TFS_Q8IVP9:146:401_5v3j_E_1 5v3j 146-401 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
11-51PF01352KRAB boxNo overlap with loaded model regions
156-178PF00096Zinc finger, C2H2 typeoverlaps 146-401
199-223PF13465Zinc-finger double domainoverlaps 146-401
240-262PF00096Zinc finger, C2H2 typeoverlaps 146-401
270-290PF00096Zinc finger, C2H2 typeoverlaps 146-401
298-318PF00096Zinc finger, C2H2 typeoverlaps 146-401
324-346PF00096Zinc finger, C2H2 typeoverlaps 146-401
379-400PF00096Zinc finger, C2H2 typeoverlaps 146-401