Region 2-34 0 PWM
- Residues
- 33 aa
- Domains
- PF00105 · Double treble clef zinc finger, C4 type
- 3D models
- 1 active PDB
- Templates
- 1BY4
- Sources
- Structure model
Transcription factor
Q8IVZ9 - NR2E3
NR2E3 protein
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 322 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M00371_2.00 | Known | CisBP | ACTTAATATATAC | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
322 aa
2-34
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 2-341 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_Q8IVZ9:2:34_1by4_A_1 | 1by4 | 2-34 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 2-26 | PF00105 | Double treble clef zinc finger, C4 type | overlaps 2-34 |
| 121-306 | PF00104 | Ligand-binding domain of nuclear hormone receptor | No overlap with loaded model regions |