ModCRE DB

Transcription factor

Q8IXK0 - PHC2

Polyhomeotic-like protein 2 (hPH2) (Early development regulatory protein 2)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 858 aa

8 Generated PWM 8 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE8
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryd_B_1 ModCRE Homology model TGGCTTCCCTCCCCGG Region 195-231 · 1 3D model Open · Scan
DIMER_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryi_B_1 ModCRE Homology model TTGCCCCAGGAGTCTT Region 195-231 · 1 3D model Open · Scan
DIMER_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryl_A_1 ModCRE Homology model TTTTTTGGGAAGAGCA Region 195-231 · 1 3D model Open · Scan
DIMER_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryl_B_1 ModCRE Homology model CCGGGAGGCCCAGCG Region 195-231 · 1 3D model Open · Scan
TFS_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryd_B_1 ModCRE Homology model CCGGGGAGGGAAGCCA Region 195-231 · 1 3D model Open · Scan
TFS_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryi_B_1 ModCRE Homology model TTGACCCCGGAGTCTT Region 195-231 · 1 3D model Open · Scan
TFS_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryl_A_1 ModCRE Homology model TGCTCTTCCCAAAAAA Region 195-231 · 1 3D model Open · Scan
TFS_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryl_B_1 ModCRE Homology model CCGGGAGGCACAGCG Region 195-231 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 858 aa
195-231

Region 195-231 8 PWM

Residues
37 aa
Domains
No overlapping PFAM annotation recorded
3D models
8 active PDBs · 8 summary rows
Templates
6RYD, 6RYI, 6RYL
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
8 active PDB models 8 summary rows
Region 195-2318 models · 8 summary rows
Actions
Predicted = Low DIMER_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryd_B_1 6ryd 195-231 View model · PDB
Predicted = Low DIMER_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryi_B_1 6ryi 195-231 View model · PDB
Predicted = Low DIMER_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryl_A_1 6ryl 195-231 View model · PDB
Predicted = Low DIMER_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryl_B_1 6ryl 195-231 View model · PDB
Predicted = Low TFS_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryd_B_1 6ryd 195-231 View model · PDB
Predicted = Low TFS_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryi_B_1 6ryi 195-231 View model · PDB
Predicted = Low TFS_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryl_A_1 6ryl 195-231 View model · PDB
Predicted = Low TFS_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryl_B_1 6ryl 195-231 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 6ryi 195:231 195,195 231,231 P:A,B · DNA:F,G 35.1% / 51.4% 62,62 View · PDB TFS_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryi_B_1
1 6ryi 195:231 195,195 231,231 P:A,B · DNA:F,G 35.1% / 51.4% 62,62 View · PDB DIMER_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryi_B_1
2 6ryd 195:231 195,195 231,231 P:A,B · DNA:C,D 35.1% / 51.4% 53,62 View · PDB TFS_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryd_B_1
2 6ryd 195:231 195,195 231,231 P:A,B · DNA:C,D 35.1% / 51.4% 53,62 View · PDB DIMER_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryd_B_1
3 6ryl 195:231 195,195 231,231 P:A,C · DNA:F,G 35.1% / 51.4% 60,57 View · PDB TFS_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryl_A_1
3 6ryl 195:231 195,195 231,231 P:A,C · DNA:F,G 35.1% / 51.4% 60,57 View · PDB DIMER_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryl_A_1
4 6ryl 195:231 195,195 231,231 P:B,C · DNA:F,G 35.1% / 51.4% 57,57 View · PDB TFS_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryl_B_1
4 6ryl 195:231 195,195 231,231 P:B,C · DNA:F,G 35.1% / 51.4% 57,57 View · PDB DIMER_sp_Q8IXK0_PHC2_HUMAN:195:231_6ryl_B_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
640-669PF21319Zinc finger, FCS-typeNo overlap with loaded model regions
670-789PF16616Unstructured region on Polyhomeotic-like protein 1 and 2No overlap with loaded model regions
793-856PF00536SAM domain (Sterile alpha motif)No overlap with loaded model regions