Region 648-698 4 PWM
- Residues
- 51 aa
- Domains
- PF00249 · Myb-like DNA-binding domain
- 3D models
- 4 active PDBs · 4 summary rows
- Templates
- 1H88, 1H89, 1MSE, 1MSF
- Sources
- Predicted = Low
Transcription factor
Q8IYH5 - ZZZ3
ZZ-type zinc finger-containing protein 3
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 903 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M01272_2.00 | Known | CisBP | TGAATCCATTT | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE4
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_sp_Q8IYH5_ZZZ3_HUMAN:648:698_1h88_C_1 | ModCRE | Homology model | CGGGTTAGGGGACGA | Region 648-698 · 1 3D model | Open · Scan | |
| TFS_sp_Q8IYH5_ZZZ3_HUMAN:648:698_1h89_C_1 | ModCRE | Homology model | CCCCCCAACGGCCCC | Region 648-698 · 1 3D model | Open · Scan | |
| TFS_sp_Q8IYH5_ZZZ3_HUMAN:655:698_1mse_C_1 | ModCRE | Homology model | TGGCAGTTTAA | Region 655-698 · 1 3D model | Open · Scan | |
| TFS_sp_Q8IYH5_ZZZ3_HUMAN:655:698_1msf_C_1 | ModCRE | Homology model | GGGTTGGTACA | Region 655-698 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
903 aa
648-698
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
4 active PDB models
4 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 648-6984 models · 4 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_sp_Q8IYH5_ZZZ3_HUMAN:648:698_1h88_C_1 | 1h88 | 648-698 | View model · PDB |
| Predicted = Low | TFS_sp_Q8IYH5_ZZZ3_HUMAN:648:698_1h89_C_1 | 1h89 | 648-698 | View model · PDB |
| Predicted = Low | TFS_sp_Q8IYH5_ZZZ3_HUMAN:655:698_1mse_C_1 | 1mse | 655-698 | View model · PDB |
| Predicted = Low | TFS_sp_Q8IYH5_ZZZ3_HUMAN:655:698_1msf_C_1 | 1msf | 655-698 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 2 | 1msf | 629:702 | 655 | 698 | P:C · DNA:A,B | 38.6% / 52.3% | 37 | View · PDB TFS_sp_Q8IYH5_ZZZ3_HUMAN:655:698_1msf_C_1 |
| 3 | 1mse | 629:702 | 655 | 698 | P:C · DNA:A,B | 38.6% / 52.3% | 37 | View · PDB TFS_sp_Q8IYH5_ZZZ3_HUMAN:655:698_1mse_C_1 |
| 1 | 1h89 | 629:702 | 648 | 698 | P:C · DNA:D,E | 37.3% / 49.0% | 40 | View · PDB TFS_sp_Q8IYH5_ZZZ3_HUMAN:648:698_1h89_C_1 |
| 4 | 1h88 | 629:702 | 648 | 698 | P:C · DNA:D,E | 37.3% / 49.0% | 30 | View · PDB TFS_sp_Q8IYH5_ZZZ3_HUMAN:648:698_1h88_C_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 655-703 | PF00249 | Myb-like DNA-binding domain | overlaps 648-698 |
| 818-864 | PF00569 | Zinc finger, ZZ type | No overlap with loaded model regions |