ModCRE DB

Transcription factor

Q8IYI8 - ZNF440

Zinc finger protein 440

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 595 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07628_2.00 Known CisBP AGTGGTTCTGCTTCT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 595 aa
169-447

Region 169-447 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13894 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 169-4471 model
Actions
Predicted = Low TFS_Q8IYI8:169:447_5wjq_D_1 5wjq 169-447 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
3-44PF01352KRAB boxNo overlap with loaded model regions
174-194PF00096Zinc finger, C2H2 typeoverlaps 169-447
284-306PF00096Zinc finger, C2H2 typeoverlaps 169-447
312-334PF00096Zinc finger, C2H2 typeoverlaps 169-447
340-362PF13894C2H2-type zinc fingeroverlaps 169-447
368-390PF00096Zinc finger, C2H2 typeoverlaps 169-447
396-418PF00096Zinc finger, C2H2 typeoverlaps 169-447
424-448PF00096Zinc finger, C2H2 typeoverlaps 169-447