ModCRE DB

Transcription factor

Q8IZ20 - ZNF683

Tissue-resident T-cell transcription regulator protein ZNF683 (Homolog of Blimp-1 in T-cell) (Hobit) (Zinc finger protein 683)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 524 aa

20 Generated PWM 10 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)11
MotifPredictionSourceDNA bindingSupportLogoActions
M03692_2.00 NN 70-40% CisBP TTCACTTTCACTT 64.5% identity Open · Scan
M02731_2.00 NN 70-40% CisBP CACTTTCACTTT 63.6% identity Open · Scan
MA0508.1 NN 70-40% JASPAR AGAAAGTGAAAGTGA 63.6% identity Open · Scan
M06112_2.00 NN 70-40% CisBP CTACTTTCACCGGGG 61.7% identity Open · Scan
M08195_2.00 NN 70-40% CisBP CACTTTCACT 58.3% identity Open · Scan
MA1579.1 NN 70-40% JASPAR TACTCCAGAAAAGAT 51.6% identity Open · Scan
MA1581.1 NN 70-40% JASPAR GTCCTTGAGCCCG 51.6% identity Open · Scan
M00608_2.00 NN 70-40% CisBP CCTGTTG 50.8% identity Open · Scan
M08320_2.00 NN 70-40% CisBP TTCCCTGCC 50.8% identity Open · Scan
M04595_2.00 NN 70-40% CisBP GTTTCCGGTAAC 50.0% identity Open · Scan
M06802_2.00 NN 70-40% CisBP ACCTTCCCCAGATAA 50.0% identity Open · Scan
ModCRE9
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q8IZ20_ZN683_HUMAN:318:448_5wjq_D_1 ModCRE Homology model GGCTATAGAACTTCTCAGTT Region 318-448 · 1 3D model Open · Scan
TFS_sp_Q8IZ20_ZN683_HUMAN:318:451_6ml5_A_1 ModCRE Homology model TCTTGGAGGGGACTCGCGT Region 318-451 · 1 3D model Open · Scan
TFS_sp_Q8IZ20_ZN683_HUMAN:318:451_6ml7_A_1 ModCRE Homology model CGGGGGAGGGACCCTGTTA Region 318-451 · 1 3D model Open · Scan
TFS_sp_Q8IZ20_ZN683_HUMAN:321:451_6ml3_A_1 ModCRE Homology model CGGGGGAGGGGCCTCGGAA Region 321-451 · 1 3D model Open · Scan
TFS_sp_Q8IZ20_ZN683_HUMAN:322:448_2i13_A_1 ModCRE Homology model GCTGCTGCTATGCCTATAGTT Region 322-448 · 1 3D model Open · Scan
TFS_sp_Q8IZ20_ZN683_HUMAN:322:448_5egb_A_1 ModCRE Homology model CCGAGGGGGCCCGAGCTT Region 322-448 · 1 3D model Open · Scan
TFS_sp_Q8IZ20_ZN683_HUMAN:322:448_5eh2_F_1 ModCRE Homology model TCCGGGGGGGGCCCCTCGT Region 322-448 · 1 3D model Open · Scan
TFS_sp_Q8IZ20_ZN683_HUMAN:322:448_5ei9_E_1 ModCRE Homology model CCCGGGGGGGGCCACCC Region 322-448 · 1 3D model Open · Scan
TFS_sp_Q8IZ20_ZN683_HUMAN:324:372_5yj3_C_1 ModCRE Homology model CCCCT Region 324-372 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 524 aa
318-451

Region 318-451 9 PWM

Residues
134 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
10 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EGB, 5EH2, 5EI9, 5WJQ, 5YJ3, 6ML3, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
10 active PDB models 6 summary rows
Region 318-45110 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q8IZ20_ZN683_HUMAN:322:368_1llm_C_1 1llm 322-368 View model · PDB
Predicted = Low TFS_sp_Q8IZ20_ZN683_HUMAN:318:448_5wjq_D_1 5wjq 318-448 View model · PDB
Predicted = Low TFS_sp_Q8IZ20_ZN683_HUMAN:318:451_6ml5_A_1 6ml5 318-451 View model · PDB
Predicted = Low TFS_sp_Q8IZ20_ZN683_HUMAN:318:451_6ml7_A_1 6ml7 318-451 View model · PDB
Predicted = Low TFS_sp_Q8IZ20_ZN683_HUMAN:321:451_6ml3_A_1 6ml3 321-451 View model · PDB
Predicted = Low TFS_sp_Q8IZ20_ZN683_HUMAN:322:448_2i13_A_1 2i13 322-448 View model · PDB
Predicted = Low TFS_sp_Q8IZ20_ZN683_HUMAN:322:448_5egb_A_1 5egb 322-448 View model · PDB
Predicted = Low TFS_sp_Q8IZ20_ZN683_HUMAN:322:448_5eh2_F_1 5eh2 322-448 View model · PDB
Predicted = Low TFS_sp_Q8IZ20_ZN683_HUMAN:322:448_5ei9_E_1 5ei9 322-448 View model · PDB
Predicted = Low TFS_sp_Q8IZ20_ZN683_HUMAN:324:372_5yj3_C_1 5yj3 324-372 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
3 6ml3 305:451 321 451 P:A · DNA:E,F 38.9% / 54.2% 99 View · PDB TFS_sp_Q8IZ20_ZN683_HUMAN:321:451_6ml3_A_1
4 6ml5 305:451 318 451 P:A · DNA:E,F 38.8% / 53.7% 80 View · PDB TFS_sp_Q8IZ20_ZN683_HUMAN:318:451_6ml5_A_1
5 6ml7 305:451 318 451 P:A · DNA:E,F 38.8% / 53.7% 79 View · PDB TFS_sp_Q8IZ20_ZN683_HUMAN:318:451_6ml7_A_1
2 5wjq 305:451 318 448 P:D · DNA:A,B 38.1% / 52.5% 46 View · PDB TFS_sp_Q8IZ20_ZN683_HUMAN:318:448_5wjq_D_1
1 2i13 305:451 322 448 P:A · DNA:C,D 37.8% / 54.8% 84 View · PDB TFS_sp_Q8IZ20_ZN683_HUMAN:322:448_2i13_A_1
1 1llm 305:451 322,322 368,368 P:C,D · DNA:A,B 34.0% / 63.8% 54,55 View · PDB DIMER_sp_Q8IZ20_ZN683_HUMAN:322:368_1llm_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
322-344PF00096Zinc finger, C2H2 typeoverlaps 318-451
350-372PF00096Zinc finger, C2H2 typeoverlaps 318-451
402-420PF00096Zinc finger, C2H2 typeoverlaps 318-451