ModCRE DB

Transcription factor

Q8IZ26 - ZNF34

Zinc finger protein 34 (Zinc finger protein KOX32)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 560 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M08371_2.00 Known CisBP CCAGACTTGTCCTCT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 560 aa
251-526

Region 251-526 0 PWM

Residues
276 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 251-5261 model
Actions
Predicted = Low TFS_Q8IZ26:251:526_5v3j_E_1 5v3j 251-526 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
35-75PF01352KRAB boxNo overlap with loaded model regions
195-217PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
251-273PF00096Zinc finger, C2H2 typeoverlaps 251-526
279-301PF00096Zinc finger, C2H2 typeoverlaps 251-526
307-329PF00096Zinc finger, C2H2 typeoverlaps 251-526
335-357PF00096Zinc finger, C2H2 typeoverlaps 251-526
363-385PF00096Zinc finger, C2H2 typeoverlaps 251-526
391-413PF00096Zinc finger, C2H2 typeoverlaps 251-526
419-441PF00096Zinc finger, C2H2 typeoverlaps 251-526
447-469PF00096Zinc finger, C2H2 typeoverlaps 251-526
475-497PF00096Zinc finger, C2H2 typeoverlaps 251-526
503-525PF00096Zinc finger, C2H2 typeoverlaps 251-526
531-553PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions