ModCRE DB

Transcription factor

Q8N141 - ZFP82

Zinc finger protein 82 homolog (Zfp-82) (Zinc finger protein 545)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 532 aa

4 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known4
MotifPredictionSourceDNA bindingSupportLogoActions
M05853_2.00 Known CisBP CCACCTTTAGCCATATCT Direct PWM Open · Scan
M08356_2.00 Known CisBP AGAATTAGTGAACTGGAAGAT Direct PWM Open · Scan
M08930_2.00 Known CisBP TTCCATTTCACTAATTCTCTCTTC Direct PWM Open · Scan
ZFP82_HUMAN.H11MO.0.C Known HOCOMOCO TTCCATTTCACTAATTCTCTCTTC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 532 aa
167-444

Region 167-444 0 PWM

Residues
278 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 167-4441 model
Actions
Predicted = Low TFS_Q8N141:167:444_5wjq_D_1 5wjq 167-444 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
5-46PF01352KRAB boxNo overlap with loaded model regions
170-192PF00096Zinc finger, C2H2 typeoverlaps 167-444
198-220PF00096Zinc finger, C2H2 typeoverlaps 167-444
254-276PF00096Zinc finger, C2H2 typeoverlaps 167-444
282-302PF00096Zinc finger, C2H2 typeoverlaps 167-444
338-360PF00096Zinc finger, C2H2 typeoverlaps 167-444
366-388PF00096Zinc finger, C2H2 typeoverlaps 167-444
394-416PF00096Zinc finger, C2H2 typeoverlaps 167-444
422-444PF00096Zinc finger, C2H2 typeoverlaps 167-444
450-472PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
478-500PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
506-528PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions