Region 673-887 0 PWM
- Residues
- 215 aa
- Domains
- No overlapping PFAM annotation recorded
- 3D models
- 4 active PDBs · 4 summary rows
- Templates
- 2I13, 7W1M, 8SSQ, 8SSR
- Sources
- Predicted = Low
Transcription factor
Q8N1G0 - ZNF687
Zinc finger protein 687
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1237 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE5
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| DIMER_sp_Q8N1G0_ZN687_HUMAN:965:1016_1llm_D_1 | ModCRE | Homology model | TCCGCCGGCGGG | Region 965-1016 · 1 3D model | Open · Scan | |
| TFS_sp_Q8N1G0_ZN687_HUMAN:1136:1158_5kkq_A_1 | ModCRE | Homology model | CCGGTAGAA | Region 1136-1158 · 1 3D model | Open · Scan | |
| TFS_sp_Q8N1G0_ZN687_HUMAN:1136:1158_5t00_A_1 | ModCRE | Homology model | CTAGTCCAA | Region 1136-1158 · 1 3D model | Open · Scan | |
| TFS_sp_Q8N1G0_ZN687_HUMAN:1136:1158_5t0u_A_1 | ModCRE | Homology model | AAACTCCGAGTTAA | Region 1136-1158 · 1 3D model | Open · Scan | |
| TFS_sp_Q8N1G0_ZN687_HUMAN:1136:1158_5yef_A_1 | ModCRE | Homology model | AATGTCCCACAAAA | Region 1136-1158 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
1237 aa
673-887
959-1028
1136-1158
Region 959-1028 1 PWM
- Residues
- 70 aa
- Domains
- PF00096 · Zinc finger, C2H2 type
- 3D models
- 2 active PDBs · 2 summary rows
- Templates
- 1LLM, 5UND
- Sources
- Predicted = Low
Region 1136-1158 4 PWM
- Residues
- 23 aa
- Domains
- PF16622 · zinc-finger C2H2-type
- 3D models
- 5 active PDBs
- Templates
- 5KKQ, 5T00, 5T0U, 5YEF
- Sources
- Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
11 active PDB models
6 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 673-8874 models · 4 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_sp_Q8N1G0_ZN687_HUMAN:673:810_2i13_A_1 | 2i13 | 673-810 | View model · PDB |
| Predicted = Low | TFS_sp_Q8N1G0_ZN687_HUMAN:673:881_7w1m_H_1 | 7w1m | 673-881 | View model · PDB |
| Predicted = Low | TFS_sp_Q8N1G0_ZN687_HUMAN:707:887_8ssq_A_1 | 8ssq | 707-887 | View model · PDB |
| Predicted = Low | TFS_sp_Q8N1G0_ZN687_HUMAN:707:887_8ssr_A_1 | 8ssr | 707-887 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 2i13 | 671:887 | 673 | 810 | P:A · DNA:C,D | 29.7% / 43.5% | 86 | View · PDB TFS_sp_Q8N1G0_ZN687_HUMAN:673:810_2i13_A_1 |
| 2 | 8ssr | 671:887 | 707 | 887 | P:A · DNA:B,C | 24.6% / 38.3% | 65 | View · PDB TFS_sp_Q8N1G0_ZN687_HUMAN:707:887_8ssr_A_1 |
| 3 | 8ssq | 671:887 | 707 | 887 | P:A · DNA:B,C | 24.6% / 38.3% | 65 | View · PDB TFS_sp_Q8N1G0_ZN687_HUMAN:707:887_8ssq_A_1 |
| 4 | 7w1m | 671:887 | 673 | 881 | P:H · DNA:F,G | 22.0% / 37.3% | 60 | View · PDB TFS_sp_Q8N1G0_ZN687_HUMAN:673:881_7w1m_H_1 |
Region 959-10282 models · 2 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_sp_Q8N1G0_ZN687_HUMAN:965:1016_1llm_D_1 | 1llm | 965-1016 | View model · PDB |
| Predicted = Low | TFS_sp_Q8N1G0_ZN687_HUMAN:959:1028_5und_A_1 | 5und | 959-1028 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 5 | 5und | 671:887 | 959 | 1028 | P:A · DNA:C,D | 30.0% / 48.6% | 40 | View · PDB TFS_sp_Q8N1G0_ZN687_HUMAN:959:1028_5und_A_1 |
| 1 | 1llm | 671:887 | 965,965 | 1016,1016 | P:C,D · DNA:A,B | 28.8% / 44.2% | 57,58 | View · PDB DIMER_sp_Q8N1G0_ZN687_HUMAN:965:1016_1llm_D_1 |
Region 1136-11585 models
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_sp_Q8N1G0_ZN687_HUMAN:1136:1158_5kkq_A_1 | 5kkq | 1136-1158 | View model · PDB |
| Predicted = Low | TFS_sp_Q8N1G0_ZN687_HUMAN:1136:1158_5t00_A_1 | 5t00 | 1136-1158 | View model · PDB |
| Predicted = Low | TFS_sp_Q8N1G0_ZN687_HUMAN:1136:1158_5t0u_A_1 | 5t0u | 1136-1158 | View model · PDB |
| Predicted = Low | TFS_sp_Q8N1G0_ZN687_HUMAN:1136:1158_5yef_A_1 | 5yef | 1136-1158 | View model · PDB |
| Predicted = Low | TFS_sp_Q8N1G0_ZN687_HUMAN:1136:1158_5yef_G_1 | 5yef | 1136-1158 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 555-599 | PF25412 | ZNF592-like C2H2 zinc finger | No overlap with loaded model regions |
| 993-1016 | PF00096 | Zinc finger, C2H2 type | overlaps 959-1028 |
| 1133-1159 | PF16622 | zinc-finger C2H2-type | overlaps 1136-1158 |
| 1201-1222 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |