Region 277-410 0 PWM
- Residues
- 134 aa
- Domains
- PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
- 3D models
- 6 active PDBs
- Templates
- 1LLM, 2I13, 5EGB, 5EH2, 5EI9, 5WJQ
- Sources
- Structure model
Transcription factor
Q8N2J5
cDNA FLJ90551 fis, clone OVARC1000779, weakly similar to ZINC FINGER PROTEIN 157
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 524 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M07703_2.00 | Known | CisBP | CCGACGG | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
524 aa
277-410
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 277-4106 models
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_Q8N2J5:377:409_1llm_C_1 | 1llm | 377-409 | View model · PDB |
| Predicted = Low | TFS_Q8N2J5:277:410_2i13_A_1 | 2i13 | 277-410 | View model · PDB |
| Predicted = Low | TFS_Q8N2J5:278:409_5wjq_D_1 | 5wjq | 278-409 | View model · PDB |
| Predicted = Low | TFS_Q8N2J5:286:402_5egb_A_1 | 5egb | 286-402 | View model · PDB |
| Predicted = Low | TFS_Q8N2J5:286:402_5ei9_E_1 | 5ei9 | 286-402 | View model · PDB |
| Predicted = Low | TFS_Q8N2J5:288:402_5eh2_F_1 | 5eh2 | 288-402 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 27-68 | PF01352 | KRAB box | No overlap with loaded model regions |
| 289-311 | PF00096 | Zinc finger, C2H2 type | overlaps 277-410 |
| 317-339 | PF00096 | Zinc finger, C2H2 type | overlaps 277-410 |
| 379-401 | PF00096 | Zinc finger, C2H2 type | overlaps 277-410 |