ModCRE DB

Transcription factor

Q8N2S2

Zinc finger protein 566

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 391 aa

1 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07677_2.00 Known CisBP CCCCGCCTCCCTTGCCGCTGC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 391 aa
138-390

Region 138-390 0 PWM

Residues
253 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models
Region 138-3906 models
Actions
Predicted = Low DIMER_Q8N2S2:281:332_1llm_D_1 1llm 281-332 View model · PDB
Predicted = Low TFS_Q8N2S2:138:390_5wjq_D_1 5wjq 138-390 View model · PDB
Predicted = Low TFS_Q8N2S2:159:390_5v3j_E_1 5v3j 159-390 View model · PDB
Predicted = Low TFS_Q8N2S2:159:390_5v3m_C_1 5v3m 159-390 View model · PDB
Predicted = Low TFS_Q8N2S2:208:361_2i13_A_1 2i13 208-361 View model · PDB
Predicted = Low TFS_Q8N2S2:252:362_5ei9_E_1 5ei9 252-362 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
5-46PF01352KRAB boxNo overlap with loaded model regions
199-221PF00096Zinc finger, C2H2 typeoverlaps 138-390
227-249PF00096Zinc finger, C2H2 typeoverlaps 138-390
269-294PF13465Zinc-finger double domainoverlaps 138-390
311-333PF00096Zinc finger, C2H2 typeoverlaps 138-390
339-361PF00096Zinc finger, C2H2 typeoverlaps 138-390
367-389PF00096Zinc finger, C2H2 typeoverlaps 138-390