ModCRE DB

Transcription factor

Q8N3P8 - DKFZp572F2170

Zinc finger protein 334

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 703 aa

47 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07740_2.00 NN 70+% CisBP TCCTGATTCCACACTCAAACATAACTTT 99.0% identity Open · Scan
Nearest Neighbor (70% - 40%)46
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.3% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 61.3% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 61.1% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 60.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.6% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 59.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 59.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 58.8% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 58.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 57.9% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 57.9% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 57.9% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 57.5% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 56.3% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 55.5% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 55.2% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 54.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 54.3% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 54.3% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 54.2% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 53.1% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 52.8% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 52.7% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 52.4% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.7% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 51.6% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 51.5% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 51.3% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 51.3% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 51.2% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.0% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 50.9% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.9% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.7% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 50.6% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 50.6% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.5% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 50.5% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 50.3% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 50.2% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.2% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 50.1% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 50.0% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 50.0% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 50.0% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 703 aa
229-507

Region 229-507 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 229-5071 model
Actions
Predicted = Low TFS_Q8N3P8:229:507_5wjq_D_1 5wjq 229-507 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
261-282PF00096Zinc finger, C2H2 typeoverlaps 229-507
288-310PF00096Zinc finger, C2H2 typeoverlaps 229-507
316-338PF00096Zinc finger, C2H2 typeoverlaps 229-507
344-366PF00096Zinc finger, C2H2 typeoverlaps 229-507
372-394PF00096Zinc finger, C2H2 typeoverlaps 229-507
401-422PF00096Zinc finger, C2H2 typeoverlaps 229-507
428-450PF13912C2H2-type zinc fingeroverlaps 229-507
456-478PF00096Zinc finger, C2H2 typeoverlaps 229-507
484-506PF00096Zinc finger, C2H2 typeoverlaps 229-507
567-589PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
595-617PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
623-645PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
651-673PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
679-701PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions