ModCRE DB

Transcription factor

Q8N981

cDNA FLJ38243 fis, clone FCBBF2006882, moderately similar to ZINC FINGER PROTEIN 83

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 212 aa

146 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)140
MotifPredictionSourceDNA bindingSupportLogoActions
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 68.9% identity Open · Scan
M05847_2.00 NN 70-40% CisBP AGACCTACTATGC 66.6% identity Open · Scan
MA1585.1 NN 70-40% JASPAR ATAGTAGGTG 66.6% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 65.5% identity Open · Scan
M07759_2.00 NN 70-40% CisBP GGAGCGCCCCTGCCCGGC 65.2% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 64.7% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 63.7% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 63.6% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 63.3% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 63.3% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 62.5% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.3% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 62.3% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 62.1% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 61.4% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.1% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 61.1% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 61.1% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 61.1% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 61.1% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 60.7% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 60.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 60.0% identity Open · Scan
M08903_2.00 NN 70-40% CisBP ATTCCATTCTATTCCATTCT 60.0% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 59.6% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 59.3% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 59.2% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 59.1% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 58.9% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 58.9% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 58.8% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 58.8% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 58.7% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 58.6% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 58.6% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 58.6% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 58.4% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 58.4% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 58.3% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 58.2% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 58.2% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 58.1% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 58.1% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 58.1% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 58.0% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 57.9% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 57.7% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 57.6% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 57.6% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 57.5% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 57.5% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 57.4% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 57.2% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 57.1% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 57.0% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 56.8% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 56.7% identity Open · Scan
M04524_2.00 NN 70-40% CisBP TAAATCACTGCATTTCACTCA 56.6% identity Open · Scan
MA0038.1 NN 70-40% JASPAR CAAATCACTG 56.6% identity Open · Scan
MA0038.2 NN 70-40% JASPAR CAAATCACTGCA 56.6% identity Open · Scan
MA0483.1 NN 70-40% JASPAR AAATCACAGCA 56.6% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 56.4% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 56.2% identity Open · Scan
MA0130.1 NN 70-40% JASPAR ATCCAC 56.2% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 55.3% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 55.3% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 55.3% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 55.2% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 55.2% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 55.1% identity Open · Scan
M07685_2.00 NN 70-40% CisBP CTTTCCAGCCAC 55.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 55.1% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.0% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 55.0% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 54.8% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 54.8% identity Open · Scan
M04480_2.00 NN 70-40% CisBP ATTGATTACCCACCCTAC 54.5% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 54.5% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 54.5% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 54.5% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 54.4% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 54.4% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 54.3% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 54.2% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 54.2% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 54.0% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 53.8% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 53.8% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 53.5% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.5% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 53.5% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.5% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 53.3% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 53.2% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 53.1% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 53.0% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 53.0% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 53.0% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 52.9% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 52.9% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 52.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.8% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.6% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 52.5% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 52.5% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 52.5% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 52.5% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 52.5% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 52.5% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 52.4% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 52.2% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 52.1% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 51.9% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 51.7% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 51.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 51.7% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 51.5% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 51.5% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 51.5% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 51.5% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 51.4% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 51.2% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 51.0% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 51.0% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 51.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.0% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 51.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.9% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 50.9% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 50.9% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.7% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 50.4% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 50.4% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.2% identity Open · Scan
M07679_2.00 NN 70-40% CisBP TGCGATCTC 50.2% identity Open · Scan
M03691_2.00 NN 70-40% CisBP ATGCAACAGGTGG 50.0% identity Open · Scan
M06087_2.00 NN 70-40% CisBP ACCACCTGTTGCA 50.0% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 50.0% identity Open · Scan
M07623_2.00 NN 70-40% CisBP GTCTAATAGAGCTGGGCTGCA 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_Q8N981_Q8N981_HUMAN:19:67_1llm_D_1 ModCRE Homology model TTTTCGCGACGA Region 19-67 · 1 3D model Open · Scan
TFS_tr_Q8N981_Q8N981_HUMAN:2:197_5v3j_E_1 ModCRE Homology model GTCCCGGCCGCACCCCCGGGCT Region 2-197 · 1 3D model Open · Scan
TFS_tr_Q8N981_Q8N981_HUMAN:2:197_5v3m_C_1 ModCRE Homology model GAACCCGGTCCCCCCCCCGCGC Region 2-197 · 1 3D model Open · Scan
TFS_tr_Q8N981_Q8N981_HUMAN:2:197_5wjq_D_1 ModCRE Homology model GGGCCCCCCCCCCCCCCTGGCT Region 2-197 · 1 3D model Open · Scan
TFS_tr_Q8N981_Q8N981_HUMAN:30:183_2i13_A_1 ModCRE Homology model CCGCTTATAAAACTAGTTCGA Region 30-183 · 1 3D model Open · Scan
TFS_tr_Q8N981_Q8N981_HUMAN:46:156_5ei9_E_1 ModCRE Homology model AGGGGCCCCACCTCGGG Region 46-156 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 212 aa
2-197

Region 2-197 6 PWM

Residues
196 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 2-1976 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q8N981_Q8N981_HUMAN:19:67_1llm_D_1 1llm 19-67 View model · PDB
Predicted = Low TFS_tr_Q8N981_Q8N981_HUMAN:2:197_5v3j_E_1 5v3j 2-197 View model · PDB
Predicted = Low TFS_tr_Q8N981_Q8N981_HUMAN:2:197_5v3m_C_1 5v3m 2-197 View model · PDB
Predicted = Low TFS_tr_Q8N981_Q8N981_HUMAN:2:197_5wjq_D_1 5wjq 2-197 View model · PDB
Predicted = Low TFS_tr_Q8N981_Q8N981_HUMAN:30:183_2i13_A_1 2i13 30-183 View model · PDB
Predicted = Low TFS_tr_Q8N981_Q8N981_HUMAN:46:156_5ei9_E_1 5ei9 46-156 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 5ei9 2:197 46 156 P:E · DNA:A,B 56.8% / 69.4% 100 View · PDB TFS_tr_Q8N981_Q8N981_HUMAN:46:156_5ei9_E_1
4 2i13 2:197 30 183 P:A · DNA:C,D 53.9% / 66.2% 100 View · PDB TFS_tr_Q8N981_Q8N981_HUMAN:30:183_2i13_A_1
1 5wjq 2:197 2 197 P:D · DNA:A,B 51.5% / 69.9% 70 View · PDB TFS_tr_Q8N981_Q8N981_HUMAN:2:197_5wjq_D_1
2 5v3m 2:197 2 197 P:C · DNA:A,B 51.5% / 69.9% 70 View · PDB TFS_tr_Q8N981_Q8N981_HUMAN:2:197_5v3m_C_1
3 5v3j 2:197 2 197 P:E · DNA:A,B 51.5% / 69.9% 70 View · PDB TFS_tr_Q8N981_Q8N981_HUMAN:2:197_5v3j_E_1
1 1llm 2:197 19,19 67,67 P:C,D · DNA:A,B 40.8% / 59.2% 56,57 View · PDB DIMER_tr_Q8N981_Q8N981_HUMAN:19:67_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
25-43PF00096Zinc finger, C2H2 typeoverlaps 2-197
49-71PF00096Zinc finger, C2H2 typeoverlaps 2-197
77-99PF00096Zinc finger, C2H2 typeoverlaps 2-197
133-155PF00096Zinc finger, C2H2 typeoverlaps 2-197