ModCRE DB

Transcription factor

Q8N9K5 - ZNF565

Zinc finger protein 565

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 539 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07700_2.00 Known CisBP ATGTTGTGAGGAAGCCCA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 539 aa
216-369

Region 216-369 0 PWM

Residues
154 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 216-3691 model
Actions
Predicted = Low TFS_Q8N9K5:216:369_2i13_A_1 2i13 216-369 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
45-86PF01352KRAB boxNo overlap with loaded model regions
208-229PF00096Zinc finger, C2H2 typeoverlaps 216-369
237-257PF00096Zinc finger, C2H2 typeoverlaps 216-369
263-285PF00096Zinc finger, C2H2 typeoverlaps 216-369
291-313PF00096Zinc finger, C2H2 typeoverlaps 216-369
319-341PF00096Zinc finger, C2H2 typeoverlaps 216-369
347-369PF00096Zinc finger, C2H2 typeoverlaps 216-369
375-397PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
403-425PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
431-453PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
459-481PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
487-509PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
515-537PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions