Transcription factor

Q8N9L1 - ZIC4

Zinc finger protein ZIC 4 (Zinc finger protein of the cerebellum 4)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 334 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5

Motif	Prediction	Source	DNA binding	Support	Actions
MA0751.1	Known	JASPAR	GACCCCCCGCTGTGC	Direct PWM	Open · Scan
MA0751.2	Known	JASPAR	GACCCCCCGCTGTG	Direct PWM	Open · Scan
M02912_2.00	Known	CisBP	GACCCCCCGCTGTGC	Direct PWM	Open · Scan
M04566_2.00	Known	CisBP	CACCCCCCGCTGCGC	Direct PWM	Open · Scan
M04567_2.00	Known	CisBP	GACCCCCTGCTGTGC	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 334 aa

144-289

Residues: 146 aa
Domains: PF18366 · Zic proteins zinc finger domain PF23561 · C2H2 zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models: 1 active PDB
Templates: 2GLI
Sources: Structure model

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 144-2891 model

				Actions
Predicted = Low	TFS_Q8N9L1:144:289_2gli_A_1	2gli	144-289	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
121-166	PF18366	Zic proteins zinc finger domain	overlaps 144-289
173-202	PF23561	C2H2 zinc finger	overlaps 144-289
204-228	PF00096	Zinc finger, C2H2 type	overlaps 144-289
264-288	PF00096	Zinc finger, C2H2 type	overlaps 144-289