ModCRE DB

Transcription factor

Q8N9M3 - ZNF135

Zinc finger protein 135

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 616 aa

1 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
MA1587.1 Known JASPAR CCTCGACCTCCTGA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 616 aa
169-611

Region 169-611 0 PWM

Residues
443 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models
Region 169-6116 models
Actions
Predicted = Low DIMER_Q8N9M3:562:611_1llm_D_1 1llm 562-611 View model · PDB
Predicted = Low TFS_Q8N9M3:169:447_5wjq_D_1 5wjq 169-447 View model · PDB
Predicted = Low TFS_Q8N9M3:209:362_2i13_A_1 2i13 209-362 View model · PDB
Predicted = Low TFS_Q8N9M3:283:559_5v3j_E_1 5v3j 283-559 View model · PDB
Predicted = Low TFS_Q8N9M3:283:559_5v3m_C_1 5v3m 283-559 View model · PDB
Predicted = Low TFS_Q8N9M3:312:610_7w1m_H_1 7w1m 312-610 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
172-194PF00096Zinc finger, C2H2 typeoverlaps 169-611
200-222PF00096Zinc finger, C2H2 typeoverlaps 169-611
228-250PF00096Zinc finger, C2H2 typeoverlaps 169-611
256-278PF00096Zinc finger, C2H2 typeoverlaps 169-611
284-306PF00096Zinc finger, C2H2 typeoverlaps 169-611
312-334PF00096Zinc finger, C2H2 typeoverlaps 169-611
340-362PF00096Zinc finger, C2H2 typeoverlaps 169-611
368-390PF00096Zinc finger, C2H2 typeoverlaps 169-611
398-418PF00096Zinc finger, C2H2 typeoverlaps 169-611
424-446PF00096Zinc finger, C2H2 typeoverlaps 169-611
452-474PF00096Zinc finger, C2H2 typeoverlaps 169-611
480-502PF00096Zinc finger, C2H2 typeoverlaps 169-611
508-530PF00096Zinc finger, C2H2 typeoverlaps 169-611
538-558PF00096Zinc finger, C2H2 typeoverlaps 169-611
564-586PF00096Zinc finger, C2H2 typeoverlaps 169-611
592-614PF00096Zinc finger, C2H2 typeoverlaps 169-611