ModCRE DB

Transcription factor

Q8NAP8 - ZBTB8B

Zinc finger and BTB domain-containing protein 8B

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 495 aa

10 Generated PWM 8 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)8
MotifPredictionSourceDNA bindingSupportLogoActions
M01538_2.00 NN 70-40% CisBP GCCCCTGA 54.0% identity Open · Scan
M01468_2.00 NN 70-40% CisBP TTACCCCTGA 52.1% identity Open · Scan
M00019_2.00 NN 70-40% CisBP ACCCCTAATT 51.5% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 51.5% identity Open · Scan
M00632_2.00 NN 70-40% CisBP ACACGCCCCT 51.2% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 51.0% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 51.0% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 50.0% identity Open · Scan
ModCRE2
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q8NAP8_ZBT8B_HUMAN:342:393_3uk3_D_1 ModCRE Homology model TCTGACCCCG Region 342-393 · 1 3D model Open · Scan
TFS_sp_Q8NAP8_ZBT8B_HUMAN:342:393_4is1_D_1 ModCRE Homology model TCTGACCCCG Region 342-393 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 495 aa
338-407

Region 338-407 2 PWM

Residues
70 aa
Domains
PF13465 · Zinc-finger double domain
3D models
8 active PDBs · 6 summary rows
Templates
1LLM, 3UK3, 4IS1, 7EYI, 7N5T, 8E3D, 8E3E
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
8 active PDB models 6 summary rows
Region 338-4078 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q8NAP8_ZBT8B_HUMAN:338:387_1llm_D_1 1llm 338-387 View model · PDB
Predicted = Low TFS_sp_Q8NAP8_ZBT8B_HUMAN:340:407_7eyi_G_1 7eyi 340-407 View model · PDB
Predicted = Low TFS_sp_Q8NAP8_ZBT8B_HUMAN:340:407_7eyi_H_1 7eyi 340-407 View model · PDB
Predicted = Low TFS_sp_Q8NAP8_ZBT8B_HUMAN:342:393_3uk3_D_1 3uk3 342-393 View model · PDB
Predicted = Low TFS_sp_Q8NAP8_ZBT8B_HUMAN:342:393_4is1_D_1 4is1 342-393 View model · PDB
Predicted = Low TFS_sp_Q8NAP8_ZBT8B_HUMAN:342:407_7n5t_A_1 7n5t 342-407 View model · PDB
Predicted = Low TFS_sp_Q8NAP8_ZBT8B_HUMAN:342:407_8e3d_A_1 8e3d 342-407 View model · PDB
Predicted = Low TFS_sp_Q8NAP8_ZBT8B_HUMAN:342:407_8e3e_A_1 8e3e 342-407 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
3 8e3e 338:416 342 407 P:A · DNA:X,Y 45.5% / 59.1% 58 View · PDB TFS_sp_Q8NAP8_ZBT8B_HUMAN:342:407_8e3e_A_1
4 8e3d 338:416 342 407 P:A · DNA:X,Y 45.5% / 59.1% 58 View · PDB TFS_sp_Q8NAP8_ZBT8B_HUMAN:342:407_8e3d_A_1
5 7n5t 338:416 342 407 P:A · DNA:X,Y 45.5% / 59.1% 58 View · PDB TFS_sp_Q8NAP8_ZBT8B_HUMAN:342:407_7n5t_A_1
1 7eyi 338:416 340 407 P:G · DNA:C,D 44.1% / 58.8% 60 View · PDB TFS_sp_Q8NAP8_ZBT8B_HUMAN:340:407_7eyi_G_1
2 7eyi 338:416 340 407 P:H · DNA:C,D 44.1% / 58.8% 59 View · PDB TFS_sp_Q8NAP8_ZBT8B_HUMAN:340:407_7eyi_H_1
1 1llm 338:416 338,338 387,387 P:C,D · DNA:A,B 36.0% / 58.0% 57,58 View · PDB DIMER_sp_Q8NAP8_ZBT8B_HUMAN:338:387_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
14-121PF00651BTB/POZ domainNo overlap with loaded model regions
356-380PF13465Zinc-finger double domainoverlaps 338-407