Region 288-343 0 PWM
- Residues
- 56 aa
- Domains
- PF00096 · Zinc finger, C2H2 type
- 3D models
- 1 active PDB
- Templates
- 1P47
- Sources
- Structure model
Transcription factor
Q8NBB4 - ZSCAN1
Zinc finger and SCAN domain-containing protein 1
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 408 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M04483_2.00 | Known | CisBP | ATGCACACACTGAAAAA | Direct PWM | Open · Scan | |
| M04484_2.00 | Known | CisBP | CTGCACACCCTGAAAAT | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
408 aa
288-343
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 288-3431 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_Q8NBB4:288:343_1p47_A_1 | 1p47 | 288-343 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 35-122 | PF02023 | SCAN domain | No overlap with loaded model regions |
| 320-342 | PF00096 | Zinc finger, C2H2 type | overlaps 288-343 |
| 380-402 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |