ModCRE DB

Transcription factor

Q8NBF1 - GLIS1

Zinc finger protein GLIS1 (GLI-similar 1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 620 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA0735.1 Known JASPAR AGACCCCCCACGAAGC Direct PWM Open · Scan
MA0735.2 Known JASPAR AGACCCCCCACGAAG Direct PWM Open · Scan
M02911_2.00 Known CisBP AGACCCCCCACGAAGC Direct PWM Open · Scan
M04564_2.00 Known CisBP CACCCCCCACGACGC Direct PWM Open · Scan
M04565_2.00 Known CisBP GCTCCGTGGGGGGTC Direct PWM Open · Scan
M08345_2.00 Known CisBP CTCTCCGGGGGGCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 620 aa
194-347

Region 194-347 0 PWM

Residues
154 aa
Domains
PF23561 · C2H2 zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1TF6
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 194-3471 model
Actions
Predicted = Low TFS_Q8NBF1:194:347_1tf6_A_1 1tf6 194-347 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
231-260PF23561C2H2 zinc fingeroverlaps 194-347
264-286PF00096Zinc finger, C2H2 typeoverlaps 194-347
294-316PF00096Zinc finger, C2H2 typeoverlaps 194-347
322-346PF00096Zinc finger, C2H2 typeoverlaps 194-347