ModCRE DB

Transcription factor

Q8NBU2

Zinc finger protein 331

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 399 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M08309_2.00 Known CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 399 aa
128-398

Region 128-398 0 PWM

Residues
271 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13912 · C2H2-type zinc finger
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 128-3981 model
Actions
Predicted = Low TFS_Q8NBU2:128:398_5wjq_D_1 5wjq 128-398 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
5-46PF01352KRAB boxNo overlap with loaded model regions
131-153PF00096Zinc finger, C2H2 typeoverlaps 128-398
159-181PF13912C2H2-type zinc fingeroverlaps 128-398
187-209PF00096Zinc finger, C2H2 typeoverlaps 128-398
215-237PF00096Zinc finger, C2H2 typeoverlaps 128-398
243-265PF00096Zinc finger, C2H2 typeoverlaps 128-398
271-293PF00096Zinc finger, C2H2 typeoverlaps 128-398
299-321PF00096Zinc finger, C2H2 typeoverlaps 128-398
327-349PF00096Zinc finger, C2H2 typeoverlaps 128-398
355-377PF13912C2H2-type zinc fingeroverlaps 128-398