ModCRE DB

Transcription factor

Q8NCC0

cDNA FLJ90362 fis, clone NT2RP2003940, weakly similar to ZINC FINGER PROTEIN 43

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 167 aa

163 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)5
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 72.9% identity Open · Scan
M07575_2.00 NN 70+% CisBP TCTCCAAGGCGGCCAGCA 72.4% identity Open · Scan
M07687_2.00 NN 70+% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 71.5% identity Open · Scan
M08934_2.00 NN 70+% CisBP GCTGTACCTGCTTATTAGGC 70.5% identity Open · Scan
M02913_2.00 NN 70+% CisBP TTCGTGGCATTTTTCTA 70.0% identity Open · Scan
Nearest Neighbor (70% - 40%)158
MotifPredictionSourceDNA bindingSupportLogoActions
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 66.8% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 64.8% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 64.2% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 61.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.1% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 61.1% identity Open · Scan
M00619_2.00 NN 70-40% CisBP TAAATCACGG 60.7% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 60.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 60.7% identity Open · Scan
M04524_2.00 NN 70-40% CisBP TAAATCACTGCATTTCACTCA 60.7% identity Open · Scan
M06039_2.00 NN 70-40% CisBP TATCTGAAA 60.7% identity Open · Scan
MA0483.1 NN 70-40% JASPAR AAATCACAGCA 60.7% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 60.1% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 60.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 60.0% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 60.0% identity Open · Scan
M07688_2.00 NN 70-40% CisBP GAGCCCCAAGCA 60.0% identity Open · Scan
M08903_2.00 NN 70-40% CisBP ATTCCATTCTATTCCATTCT 60.0% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 59.7% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 59.6% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 59.5% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 59.2% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 58.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 58.8% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 58.7% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 58.7% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 58.7% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 58.5% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.4% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 58.1% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 58.1% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 57.9% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 57.8% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 57.4% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 57.4% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 57.4% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 57.4% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 57.3% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 57.3% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 57.3% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 57.2% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 57.2% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 56.9% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 56.9% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 56.9% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 56.7% identity Open · Scan
M01453_2.00 NN 70-40% CisBP ACGCCACA 56.5% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.3% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 56.3% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 56.3% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 55.8% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 55.7% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 55.6% identity Open · Scan
M01444_2.00 NN 70-40% CisBP CACTGCCAC 55.5% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 55.4% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 55.4% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 55.4% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 55.2% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 55.2% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 55.2% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.0% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 54.9% identity Open · Scan
M06087_2.00 NN 70-40% CisBP ACCACCTGTTGCA 54.8% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 54.8% identity Open · Scan
M07650_2.00 NN 70-40% CisBP GGTCTATAAAAGGGGGGCCGCGGGGGGG 54.8% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 54.8% identity Open · Scan
MA0744.1 NN 70-40% JASPAR ATGCAACAGGTGG 54.8% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 54.6% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 54.5% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 54.3% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 54.2% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.2% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 54.2% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 54.2% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 54.0% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 53.9% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 53.9% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 53.9% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 53.7% identity Open · Scan
M04480_2.00 NN 70-40% CisBP ATTGATTACCCACCCTAC 53.6% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 53.6% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 53.5% identity Open · Scan
M01432_2.00 NN 70-40% CisBP GACGCCAC 53.3% identity Open · Scan
M03677_2.00 NN 70-40% CisBP TGCTACCGTGTTACGCA 53.3% identity Open · Scan
M06088_2.00 NN 70-40% CisBP GCTACTGGGTTTA 53.3% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 53.3% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 53.0% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 53.0% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 53.0% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 52.7% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 52.7% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.7% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 52.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 52.5% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 52.5% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 52.5% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 52.5% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 52.4% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.4% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 52.4% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 52.4% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 52.4% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 52.4% identity Open · Scan
M08977_2.00 NN 70-40% CisBP AAATCACAGC 52.3% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 52.1% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 51.8% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 51.8% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 51.8% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 51.8% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 51.8% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 51.6% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 51.5% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 51.5% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 51.5% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 51.5% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 51.5% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.3% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 51.3% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.2% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 51.2% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.2% identity Open · Scan
M09515_2.00 NN 70-40% CisBP CCCGCCCACGCA 51.1% identity Open · Scan
MA0162.1 NN 70-40% JASPAR TGCGTGGGCGG 51.1% identity Open · Scan
MA0162.2 NN 70-40% JASPAR CCCCCGCCCCCGCC 51.1% identity Open · Scan
MA0472.1 NN 70-40% JASPAR CCCCCGCCCACGCAC 51.1% identity Open · Scan
MA0472.2 NN 70-40% JASPAR ACGCCCACGCA 51.1% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 51.0% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 51.0% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 50.9% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 50.9% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.8% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 50.6% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.6% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 50.6% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 50.6% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 50.6% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 50.6% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 50.6% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 50.6% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 50.5% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.5% identity Open · Scan
M01457_2.00 NN 70-40% CisBP GCGCACGGAC 50.4% identity Open · Scan
M08239_2.00 NN 70-40% CisBP GGGCCGCTCTAGGCTGCCGG 50.4% identity Open · Scan
M00132_2.00 NN 70-40% CisBP TGCTACCGTT 50.0% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 50.0% identity Open · Scan
M01174_2.00 NN 70-40% CisBP GCTACCGT 50.0% identity Open · Scan
M01531_2.00 NN 70-40% CisBP CCCCCCCTAAAT 50.0% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 50.0% identity Open · Scan
M06072_2.00 NN 70-40% CisBP CCACGCCCACGCAC 50.0% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 50.0% identity Open · Scan
M07679_2.00 NN 70-40% CisBP TGCGATCTC 50.0% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 50.0% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 50.0% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 50.0% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.0% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 50.0% identity Open · Scan
MA1542.1 NN 70-40% JASPAR TGCTACTGTT 50.0% identity Open · Scan
MA1646.1 NN 70-40% JASPAR AAACAGAAGCAG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 167 aa
1-144

Region 1-144 0 PWM

Residues
144 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1-1441 model
Actions
Predicted = Low TFS_Q8NCC0:1:144_5t0u_A_1 5t0u 1-144 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
10-32PF00096Zinc finger, C2H2 typeoverlaps 1-144
52-76PF13465Zinc-finger double domainoverlaps 1-144
81-105PF13465Zinc-finger double domainoverlaps 1-144
122-142PF00096Zinc finger, C2H2 typeoverlaps 1-144