ModCRE DB

Transcription factor

Q8ND82 - ZNF280C

Zinc finger protein 280C (Suppressor of hairy wing homolog 3) (Zinc finger protein 633)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 737 aa

5 Generated PWM 10 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q8ND82_Z280C_HUMAN:355:492_5v3j_E_1 ModCRE Homology model ACGGGGCTGCGGGGATACAGGAA Region 355-492 · 1 3D model Open · Scan
TFS_sp_Q8ND82_Z280C_HUMAN:355:492_5v3m_C_1 ModCRE Homology model ATGGCCTGGTTGGTGGTTGGATG Region 355-492 · 1 3D model Open · Scan
TFS_sp_Q8ND82_Z280C_HUMAN:355:492_5wjq_D_1 ModCRE Homology model CGGCCGGGGGGGGGGGAATGGAA Region 355-492 · 1 3D model Open · Scan
TFS_sp_Q8ND82_Z280C_HUMAN:355:494_5t0u_A_1 ModCRE Homology model TATGAGCGGTATTTATTTCCTAA Region 355-494 · 1 3D model Open · Scan
TFS_sp_Q8ND82_Z280C_HUMAN:385:494_5kkq_A_1 ModCRE Homology model CGTTAGTATCGTTCGGT Region 385-494 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 737 aa
354-494

Region 354-494 5 PWM

Residues
141 aa
Domains
No overlapping PFAM annotation recorded
3D models
10 active PDBs · 5 summary rows
Templates
5KKQ, 5T0U, 5V3J, 5V3M, 5WJQ, 6ML4, 6ML5, 6ML6, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
10 active PDB models 5 summary rows
Region 354-49410 models · 5 summary rows
Actions
Predicted = Low TFS_sp_Q8ND82_Z280C_HUMAN:354:492_6ml4_A_1 6ml4 354-492 View model · PDB
Predicted = Low TFS_sp_Q8ND82_Z280C_HUMAN:354:492_6ml5_A_1 6ml5 354-492 View model · PDB
Predicted = Low TFS_sp_Q8ND82_Z280C_HUMAN:354:492_6ml6_A_1 6ml6 354-492 View model · PDB
Predicted = Low TFS_sp_Q8ND82_Z280C_HUMAN:354:492_6ml7_A_1 6ml7 354-492 View model · PDB
Predicted = Low TFS_sp_Q8ND82_Z280C_HUMAN:355:492_5v3j_E_1 5v3j 355-492 View model · PDB
Predicted = Low TFS_sp_Q8ND82_Z280C_HUMAN:355:492_5v3m_C_1 5v3m 355-492 View model · PDB
Predicted = Low TFS_sp_Q8ND82_Z280C_HUMAN:355:492_5wjq_D_1 5wjq 355-492 View model · PDB
Predicted = Low TFS_sp_Q8ND82_Z280C_HUMAN:355:494_5t0u_A_1 5t0u 355-494 View model · PDB
Predicted = Low TFS_sp_Q8ND82_Z280C_HUMAN:355:494_8sss_A_1 8sss 355-494 View model · PDB
Predicted = Low TFS_sp_Q8ND82_Z280C_HUMAN:385:494_5kkq_A_1 5kkq 385-494 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 6ml7 354:494 354 492 P:A · DNA:E,F 28.8% / 40.3% 93 View · PDB TFS_sp_Q8ND82_Z280C_HUMAN:354:492_6ml7_A_1
2 6ml6 354:494 354 492 P:A · DNA:E,F 28.8% / 40.3% 93 View · PDB TFS_sp_Q8ND82_Z280C_HUMAN:354:492_6ml6_A_1
3 6ml4 354:494 354 492 P:A · DNA:E,F 28.8% / 40.3% 93 View · PDB TFS_sp_Q8ND82_Z280C_HUMAN:354:492_6ml4_A_1
4 6ml5 354:494 354 492 P:A · DNA:E,F 28.8% / 40.3% 94 View · PDB TFS_sp_Q8ND82_Z280C_HUMAN:354:492_6ml5_A_1
5 8sss 354:494 355 494 P:A · DNA:B,C 26.4% / 41.4% 69 View · PDB TFS_sp_Q8ND82_Z280C_HUMAN:355:494_8sss_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
46-227PF13836Domain of unknown function (DUF4195)No overlap with loaded model regions
618-659PF25429POGZ-like double zinc fingerNo overlap with loaded model regions
681-719PF25414Z280C/D-like C2H2 zinc fingerNo overlap with loaded model regions