ModCRE DB

Transcription factor

Q8NHV9 - RHOXF1

Rhox homeobox family member 1 (Ovary-, testis- and epididymis-expressed gene protein) (Paired-like homeobox protein PEPP-1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 184 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8
MotifPredictionSourceDNA bindingSupportLogoActions
MA0719.1 Known JASPAR ATAATCCC Direct PWM Open · Scan
MA0719.2 Known JASPAR TAATCC Direct PWM Open · Scan
M03089_2.00 Known CisBP GGATAATCC Direct PWM Open · Scan
M03090_2.00 Known CisBP ATAATCCC Direct PWM Open · Scan
M03091_2.00 Known CisBP GGATAATCC Direct PWM Open · Scan
M03092_2.00 Known CisBP TTAATCCC Direct PWM Open · Scan
M04947_2.00 Known CisBP TTGATCCC Direct PWM Open · Scan
M04948_2.00 Known CisBP TTGATCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 184 aa
104-157

Region 104-157 0 PWM

Residues
54 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
6A8R
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 104-1571 model
Actions
Predicted = Low DIMER_Q8NHV9:104:157_6a8r_B_1 6a8r 104-157 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
104-160PF00046Homeodomainoverlaps 104-157