ModCRE DB

Transcription factor

Q8NI51 - CTCFL

Transcriptional repressor CTCFL (Brother of the regulator of imprinted sites) (CCCTC-binding factor) (CTCF paralog) (CTCF-like protein) (Cancer/testis antigen 27) (CT27) (Zinc finger protein CTCF-T)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 663 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8
MotifPredictionSourceDNA bindingSupportLogoActions
MA1102.1 Known JASPAR CACCAGGGGGCACC Direct PWM Open · Scan
MA1102.2 Known JASPAR AGCAGGGGGCGC Direct PWM Open · Scan
MA1102.3 Known JASPAR CAGGGGGC Direct PWM Open · Scan
M07930_2.00 Known CisBP GGCGCCCCCTGGCGG Direct PWM Open · Scan
M08089_2.00 Known CisBP GGTGCCCCCTGGTG Direct PWM Open · Scan
M08885_2.00 Known CisBP CGGCGCCCCCTGGCGGC Direct PWM Open · Scan
M09507_2.00 Known CisBP CCCCGGCGCCCCCTGGTGGC Direct PWM Open · Scan
CTCFL_HUMAN.H11MO.0.A Known HOCOMOCO GCCGCCAGGGGGCGCCG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 663 aa
285-453

Region 285-453 0 PWM

Residues
169 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 285-4531 model
Actions
Predicted = Low TFS_Q8NI51:285:453_5t0u_A_1 5t0u 285-453 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
313-336PF00096Zinc finger, C2H2 typeoverlaps 285-453
398-421PF00096Zinc finger, C2H2 typeoverlaps 285-453
428-451PF00096Zinc finger, C2H2 typeoverlaps 285-453
546-564PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions