ModCRE DB

Transcription factor

Q8TAQ5 - ZNF420

Zinc finger protein 420

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 688 aa

97 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M04653_2.00 NN 70+% CisBP GGTACGGTTGTCCATGTTGCAA 73.4% identity Open · Scan
M00939_2.00 NN 70+% CisBP CCACCTCA 71.7% identity Open · Scan
M00955_2.00 NN 70+% CisBP ACGTCCTCT 70.2% identity Open · Scan
Nearest Neighbor (70% - 40%)94
MotifPredictionSourceDNA bindingSupportLogoActions
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 67.5% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 64.9% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 64.7% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 64.7% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 64.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.7% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 64.2% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 63.7% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 63.7% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.5% identity Open · Scan
M07666_2.00 NN 70-40% CisBP ATCTAGCCCCTGCCTACC 62.5% identity Open · Scan
M07759_2.00 NN 70-40% CisBP GGAGCGCCCCTGCCCGGC 62.5% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 60.9% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 60.8% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 60.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 60.5% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 60.3% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 59.7% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 59.6% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 59.5% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 59.4% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 59.4% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 59.1% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 58.8% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 58.8% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 58.6% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 58.6% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 58.4% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 58.3% identity Open · Scan
M05855_2.00 NN 70-40% CisBP GTATTATACCCAGCT 58.0% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 57.8% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 57.7% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 57.6% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 57.4% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 57.3% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 57.1% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 57.0% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 56.9% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 56.6% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 56.6% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 56.4% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.3% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 55.9% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 55.9% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 55.7% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 54.6% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 54.6% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 54.4% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 54.3% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 54.2% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 54.2% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 54.2% identity Open · Scan
M07634_2.00 NN 70-40% CisBP AAACGTCCACG 54.1% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 54.1% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 54.0% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 53.9% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 53.7% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 53.5% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 53.4% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 53.3% identity Open · Scan
M10391_2.00 NN 70-40% CisBP TACCCCACATTTATTTA 53.3% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 53.1% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 53.0% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 52.7% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 52.6% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 52.5% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 52.4% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 52.3% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 52.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 51.6% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 51.4% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 51.3% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 51.3% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 51.3% identity Open · Scan
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 51.2% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 51.1% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 50.9% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 50.9% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 50.8% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 50.5% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 50.5% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 50.4% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 50.4% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.4% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 50.4% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 50.3% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 50.1% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 50.0% identity Open · Scan
MA0750.1 NN 70-40% JASPAR GGCGACCACCGA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 688 aa
120-273

Region 120-273 0 PWM

Residues
154 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 120-2731 model
Actions
Predicted = Low TFS_Q8TAQ5:120:273_2i13_A_1 2i13 120-273 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
5-46PF01352KRAB boxNo overlap with loaded model regions
139-161PF00096Zinc finger, C2H2 typeoverlaps 120-273
167-189PF00096Zinc finger, C2H2 typeoverlaps 120-273
195-217PF00096Zinc finger, C2H2 typeoverlaps 120-273
223-245PF00096Zinc finger, C2H2 typeoverlaps 120-273
251-273PF00096Zinc finger, C2H2 typeoverlaps 120-273
279-301PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
335-357PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
363-385PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
391-413PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
419-441PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
447-469PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
475-497PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
503-525PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
531-553PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
559-581PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
587-609PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
629-654PF13465Zinc-finger double domainNo overlap with loaded model regions