ModCRE DB

Transcription factor

Q8TAU3 - ZNF417

Zinc finger protein 417

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 575 aa

44 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known3
MotifPredictionSourceDNA bindingSupportLogoActions
MA1727.1 Known JASPAR CACATTGGGCGCCAA Direct PWM Open · Scan
MA1727.2 Known JASPAR GGCGCCA Direct PWM Open · Scan
M07639_2.00 Known CisBP TTGGCGCCCAACGTGGGGCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07746_2.00 NN 70+% CisBP CAGCTGGCGCCCAACATGGGTCCC 98.1% identity Open · Scan
Nearest Neighbor (70% - 40%)40
MotifPredictionSourceDNA bindingSupportLogoActions
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 65.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 65.8% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 65.7% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 63.4% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.4% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 62.3% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 59.9% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 59.7% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 58.8% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 57.8% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 57.6% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 57.2% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 56.9% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 56.5% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 55.1% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 53.7% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 53.7% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 53.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 52.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.8% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 52.8% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 52.6% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 52.5% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 52.3% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 52.0% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 51.9% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 51.8% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 51.4% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.2% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 51.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 50.7% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 50.6% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 50.6% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 50.1% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 575 aa
267-543

Region 267-543 0 PWM

Residues
277 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 267-5431 model
Actions
Predicted = Low TFS_Q8TAU3:267:543_5wjq_D_1 5wjq 267-543 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
15-55PF01352KRAB boxNo overlap with loaded model regions
240-262PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
268-290PF00096Zinc finger, C2H2 typeoverlaps 267-543
296-318PF00096Zinc finger, C2H2 typeoverlaps 267-543
352-374PF00096Zinc finger, C2H2 typeoverlaps 267-543
380-402PF00096Zinc finger, C2H2 typeoverlaps 267-543
408-430PF00096Zinc finger, C2H2 typeoverlaps 267-543
436-458PF00096Zinc finger, C2H2 typeoverlaps 267-543
464-486PF00096Zinc finger, C2H2 typeoverlaps 267-543
492-514PF00096Zinc finger, C2H2 typeoverlaps 267-543
520-542PF00096Zinc finger, C2H2 typeoverlaps 267-543
548-570PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions