ModCRE DB

Transcription factor

Q8TD23 - ZNF675

Zinc finger protein 675 (TRAF6-binding zinc finger protein) (TRAF6-inhibitory zinc finger protein)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 568 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
M08381_2.00 Known CisBP ACATTTTGTCCTCCTAGTCCT Direct PWM Open · Scan
MA1714.1 Known JASPAR AGGACTAGGAGGACAAAATGT Direct PWM Open · Scan
MA1714.2 Known JASPAR GGACTAGGAGGACAAAATG Direct PWM Open · Scan
M07722_2.00 Known CisBP ACATTTTGTCCTCCTGGCCCCCCCGCC Direct PWM Open · Scan
M08266_2.00 Known CisBP TGTCCTCTTAATCCGGTTCA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 568 aa
253-363

Region 253-363 0 PWM

Residues
111 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EGB
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 253-3631 model
Actions
Predicted = Low TFS_Q8TD23:253:363_5egb_A_1 5egb 253-363 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
4-44PF01352KRAB boxNo overlap with loaded model regions
172-192PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
256-278PF00096Zinc finger, C2H2 typeoverlaps 253-363
284-306PF00096Zinc finger, C2H2 typeoverlaps 253-363
312-334PF00096Zinc finger, C2H2 typeoverlaps 253-363
340-362PF00096Zinc finger, C2H2 typeoverlaps 253-363
368-390PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
396-418PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
424-446PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
452-474PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
480-502PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
508-530PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
536-558PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions